Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00150 ATGGCAACTGTGGATCTGGCTACAGGGCTCAATCATCTTCACAGTTTCACTTCCCCTTCACATATTGACAAGAATTTGAATAGCAGTAACGTTCTTCTTGACAATGACTTGAGGAGAAAGATAGCGAATTTTGGTCTAGAAAGATCAGCTGAAGGAGATGATGGTGAACTGGCATTTACGCGACACGTTGATGGGCCAACAGGTTATATGGCTCCAAAGTTCTTGGAAAATGGTTTAGTATATGATAAGCTTGATGTATATGCTTTTGGAGTTTTCATACTGGAAGTGCTAAGCAGGAAAGAGGTTTCTTCATTCTGTACGGAGGAAGATGGAGAGGACAAAATGAATAATTTCATGGATCATTCATTGAAGGGAAACTATTCAACAGAACTCGGAGTTTTTGTGATAAGGCTCGTCGATAGTTTCCTACAGAAAGATCCTACTGGTCATCCCTCCATGGATGAGATTGTGCAATCTCTGTCACTATCCTTAAACAAGGTGGGAGATGCCTTAAACATAGTTTGTCTGGCGCATAGTTGTTGCCAAGCCCTTCTCTCCGATATTTGGAAAGGATGTGGAAAACATGCTACTTGA 594 0.4125 MATVDLATGLNHLHSFTSPSHIDKNLNSSNVLLDNDLRRKIANFGLERSAEGDDGELAFTRHVDGPTGYMAPKFLENGLVYDKLDVYAFGVFILEVLSRKEVSSFCTEEDGEDKMNNFMDHSLKGNYSTELGVFVIRLVDSFLQKDPTGHPSMDEIVQSLSLSLNKVGDALNIVCLAHSCCQALLSDIWKGCGKHAT* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00150 197 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 165 - -
Pte10g00150 197 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00150 197 Gene3D Transferase(Phosphotransferase) domain 1 2 174 - -
Pte10g00150 197 Pfam Protein tyrosine and serine/threonine kinase 3 160 IPR001245 GO:0004672|GO:0006468
Pte10g00150 197 SUPERFAMILY Protein kinase-like (PK-like) 4 160 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00150 Pte-Chr10 1429299 1429999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00150 5 162 Receptor kinase-like Gene Family AT2G33580 38.764 1.86e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte10g00150 PK_Tyr_Ser-Thr 1.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00150 - - qsa:O6P43_024718 203.756