Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00142 ATGACATCAATAGCGAGCTCTTCTGGCACAAAGGGTGATGATCAAGATGCGGTGTACTCCTACGGGGAGCTTACCCAGGTCCCTCCACTCTACTTCCTGAGAGGTGGAGACAGTAGCTCAGAGAACAAATGGAGTGATGAGCTAGGTGGCGATTCGGATGAAGAGTTCCAGTTCGACATCAACCCCAGCCTTCTGTTGGACCTCAGCAAATTGCAGATTGATGAAGTGATTGGTGAAGGGGCTCGGTATGAATCCCAGCATGTTGCTGTGAAGGTGATTCTCCCATTCAGAACAGCACTTGCAAGGCGTGCAACCAAGGAAAATTTTCAGAGGGAGGTCAACTCACTGGCCAAGGTGAAGCATGAAAACATTGTGAAGTTTGTTGGTGCCATTGTCGAGCCAAAGATGATGATAGTCAGTGAGCTGATCAAAGGCGGTACACTTCATGGTTATCTAAAGGCCATCTTTCCTGAGAAGCCAGATTTGGAGCAATCTATCAAATTTGCTCTTGATATTTCTCGCGCTATGACGTGCTTGCATGCAAATAATATCATTCATCGAGATCTGAAGCCAGGAAATTTACTTCTCACAGTAGATTGGACAACCCTTAAGCTTTGTGACTTTGGGCTGGCTAGGGATGCGTCAGCAGATGTTATGACCACAGAAGCTGGAACATACCGCTGGATGGCTCCTGAGTTATTCTTTATAGACCCGGTTCAAAAGGGTGAAAAGAAACGCTATGACCACAAGGTAGATGTGTTCAGCTTTGCAATAGTGCTATGGATGCTTCTCACAAACAAATTTCCTTTTAGAGGGTCTAGCAACATAATGGCAGCGTACGCCACAGCAAGGAACATTAGGCCCAGTCTGGAGAATATTCCAGAAGCATTAAAACCCCTTCTGGAATCCTGTTGGGCAGCAGAGCCAAATCATCGCCCAGAGTTTCGGGAGATCACTGACTTCCTTACAAGATTTCAGCGCTTGGAATTGTCATACGAGAATGATTCTCATGCAATGGATGCAGCTGAAGCCATAACTAGGATGCAGGAGATGTCTGAGACTCCAGGGCCTGATGGTGTGGATCCTAACTCAAAAGGTAAAACTGAGATGTCTGAGAGGACAGACTTCCTCACTAGACTACAACGCTTGGAATTCCGAAACGAAAATGCTTATCCTACGATGGAAGCAGCTGAAGCCATGACCGGGGTGCAGGAGATGTCTGAGACTCAAGAGCCTGACAATGTGGAGACTCCTGGGCCTGACATTGTGGATCCTAAGCCAAAAGTGAAAAGTAAGAAGCGGAAGTGGTTTTCAATCAGGTCTCTCAAATGCTTTTTCTGCTTTCAGTAA 1350 0.4644 MTSIASSSGTKGDDQDAVYSYGELTQVPPLYFLRGGDSSSENKWSDELGGDSDEEFQFDINPSLLLDLSKLQIDEVIGEGARYESQHVAVKVILPFRTALARRATKENFQREVNSLAKVKHENIVKFVGAIVEPKMMIVSELIKGGTLHGYLKAIFPEKPDLEQSIKFALDISRAMTCLHANNIIHRDLKPGNLLLTVDWTTLKLCDFGLARDASADVMTTEAGTYRWMAPELFFIDPVQKGEKKRYDHKVDVFSFAIVLWMLLTNKFPFRGSSNIMAAYATARNIRPSLENIPEALKPLLESCWAAEPNHRPEFREITDFLTRFQRLELSYENDSHAMDAAEAITRMQEMSETPGPDGVDPNSKGKTEMSERTDFLTRLQRLEFRNENAYPTMEAAEAMTGVQEMSETQEPDNVETPGPDIVDPKPKVKSKKRKWFSIRSLKCFFCFQ* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00142 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Pte10g00142 449 Gene3D Transferase(Phosphotransferase) domain 1 57 354 - -
Pte10g00142 449 CDD STKc_MAP3K-like 77 322 - -
Pte10g00142 449 PRINTS Tyrosine kinase catalytic domain signature 178 196 IPR001245 GO:0004672|GO:0006468
Pte10g00142 449 PRINTS Tyrosine kinase catalytic domain signature 293 315 IPR001245 GO:0004672|GO:0006468
Pte10g00142 449 PRINTS Tyrosine kinase catalytic domain signature 224 234 IPR001245 GO:0004672|GO:0006468
Pte10g00142 449 PRINTS Tyrosine kinase catalytic domain signature 140 153 IPR001245 GO:0004672|GO:0006468
Pte10g00142 449 Pfam Protein tyrosine and serine/threonine kinase 84 322 IPR001245 GO:0004672|GO:0006468
Pte10g00142 449 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 67 325 - -
Pte10g00142 449 SUPERFAMILY Protein kinase-like (PK-like) 62 335 IPR011009 -
Pte10g00142 449 ProSiteProfiles Protein kinase domain profile. 71 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00142 449 MobiDBLite consensus disorder prediction 351 371 - -
Pte10g00142 449 SMART serkin_6 71 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00142 449 MobiDBLite consensus disorder prediction 405 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00142 Pte-Chr10 1349534 1353335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00142 53 345 MAP Kinase Kinase Kinase AT5G66710 50.831 7.93e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pte10g00142 PK_Tyr_Ser-Thr 8.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00142 - - cmos:111453575 330.872