Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00141 ATGAGAGTTTCTGTTTCATCACCACAAACCAACAGCAGCGGTAACAACAACCACACCAACCGTTCTCCAAACCCAAAACCCAACAACGTCTCTGACAGCACTATTGTTCCCCGGAATATAGGTCACCTTCAGAATCCCACCAATAATCCAAATTTGTGTTACGAACCCACCTCTGTGCTTGACCTACGTCGTAGTCCAAGCCCAGTGGGTGTTCCCGAAAAACCCACAGGTCTTTCAGCCATAACTGACAAGCTGTCAAAGCCGGAAGACCCCCTTGAATTGGACGAGCATGTGCTGCACAATTTTGACTGGGATTCAGTCATGAAAGACCTGGGTTTGCATGATGAGTCAGCCAACTCTGTGTTCAAGAATTCCCTCCAATCAAACCCCTTCGAAGTTCAAGGTCCTCATCTATCTGAATTCCCAAACAATCATGAGCCACCGGCCTTTGATCACAACGATTTCACGCTCTCCGAGGTCTATTCCAATCAAAATCTGGCATACAACTACAACCCTTTCGATCATTTGAGCCACGACTTTCAACATCATCAAAGCAATTTGACAAACATAGGATTTGATTTTGTCGAAGAGCTTATCAAGGCAGCTGAATGCTTCGACACCAACGAGTTGCAACTGGCTCAGGTGATATTGGAGCGGCTCAACCAACGCCTCCGATCTCCAACCGGGAAACCACTCCAGAGAGCTGGATTTTACTTCAAAGAAGCACTCCAATCCGTTCTCTCCAATTCGAACCGGACTACAAGACTCTCTTCCTGGTCTGAAATTGTTCAGACCATCAGAACCTACAAGGCGTTCTCCGGGATCTCCCCAATCCCCATGTTTGCTCAATTCACCACCAATCAAGCTCTTCTGGAAGCGCTATCTGGATCTGCCTTTATTCACATCATAGACTTCGATATTGGCCTGGGAGGCCAATACGCTTCTCTCATGAAAGAGATAGCCGAGAAGGCCGACGCCTGCAAAATCAACCTACCTGTGCTTCGCATCACTGCTATTGTCCCCGAAGAATATGCAGTAGAAAGCAGATTGATCAGAGAGAATCTAACCCAATTCGCTCAAGAACTCAGAATTAGGTTCCAAGTAGAGTTCGTGCAGACACGTATTTTCGAGTCACTGTCGTTCAAAACTGTGAAGTTCATGGAAGGCGAGAAGTCCGCCGTTCTTTTATCCCCTTCAATCTTCCGCCGTTTGGGTGCGACCAACAATATTGGTGCTTTCCTCAGCGACATGCGAAGAGTTTCTCCCAGTGTCGTTGTTTTCGTTGACGGGGAAGGATGGACGGAAACGACAGGGGCGACGTCGTTTCGTAGGAATTTCGTGAGCGGGCTTGAGTTCTACACGATGATGTTGGAGTCTCTGGACGCGTCAATGGCAGGAGGTGGCGGTGAGTGGATACGGAGGATCGAGATGCTTCTTTTGAAACCCAAGATATTGGGAGGGGTGGAGGGTGCGGGAAGGCGGGTTCCACCGTGGAGGGAAGTGTTCTACGGAGCAGGAATGAGGCCGGTTCAGTTAAGTCAGTTTGCTGATTTTCAAGCCGAGTGTTTGTTGGGGAAAATACAGGTAAGGGGTTTCCAAGTAGCAAAACGACAGGCTGAATTGGTGCTTTGTTGGCATGACCGTGCGATGGTTGCTACTTCTGCTTGGCGGTGTTGA 1677 0.4854 MRVSVSSPQTNSSGNNNHTNRSPNPKPNNVSDSTIVPRNIGHLQNPTNNPNLCYEPTSVLDLRRSPSPVGVPEKPTGLSAITDKLSKPEDPLELDEHVLHNFDWDSVMKDLGLHDESANSVFKNSLQSNPFEVQGPHLSEFPNNHEPPAFDHNDFTLSEVYSNQNLAYNYNPFDHLSHDFQHHQSNLTNIGFDFVEELIKAAECFDTNELQLAQVILERLNQRLRSPTGKPLQRAGFYFKEALQSVLSNSNRTTRLSSWSEIVQTIRTYKAFSGISPIPMFAQFTTNQALLEALSGSAFIHIIDFDIGLGGQYASLMKEIAEKADACKINLPVLRITAIVPEEYAVESRLIRENLTQFAQELRIRFQVEFVQTRIFESLSFKTVKFMEGEKSAVLLSPSIFRRLGATNNIGAFLSDMRRVSPSVVVFVDGEGWTETTGATSFRRNFVSGLEFYTMMLESLDASMAGGGGEWIRRIEMLLLKPKILGGVEGAGRRVPPWREVFYGAGMRPVQLSQFADFQAECLLGKIQVRGFQVAKRQAELVLCWHDRAMVATSAWRC* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00141 558 Pfam GRAS domain family 195 557 IPR005202 -
Pte10g00141 558 ProSiteProfiles GRAS family profile. 185 557 IPR005202 -
Pte10g00141 558 MobiDBLite consensus disorder prediction 1 51 - -
Pte10g00141 558 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 160 552 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00141 Pte-Chr10 1339656 1342140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00141 92 557 GRAS Transcription Factor Family AT4G36710 55.372 1.58e-177 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte10g00141 GRAS 1.2e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00141 - - qsa:O6P43_024734 800.045