Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00126 ATGGATGTAGACACTTTGAATGCCTCTGCAGCAGATAACTGCATGGACGTGATGACCATGATGATGCAAATGGAAAGGTTCCCTGAATTCTGTGACCCATTTTATAGCAACACAACATACTCTGACGACAAACAGCCAATATTACTCGGTAATTCTTGTACACCATCACAAACTCTGATGACAAACCCTTCATATTCTGCTGCATACGTGAGCAATGTAATTCAAAAGCCAGTCACGCCTGCACTTCAGTCCGATGCGATCTCAGGTATACTGGAGAGTACTCCCCACACGCCGTACCATCCTTCATCTGTCAAGAAAAACTCCATGGCAGCGATGAGAGAGATGATATTCCGAATGGCAGTGATGCAACCTATTCATATTGACCCTGAATCGATCAAGCCGCCAAAGAGAAGAAATGTGAAGATCTCAACGGATCCGCAAAGCGTCGCAGCGAGGCATAGGAGAGAAAGGATAAGCGAGAGAATAAGGATCCTACAGAAACTTGTTCCTGGCGGCACTAAGATGGACACAGCTTCTATGTTGGATGAAGCTATACATTACGTTAAATTCTTGAAGAAACAAGTGCAGACCCTCGAACAAGCTGGAGCTAACAGACCGTTGGGCATTTCTCTGCCTGGAACTGTAAACACCAATGTGAGTTGCTCAGAACTATTCAAGGGTGATCACTCGTGTATTGGATCGATGCACATGCTTAGGTGA 720 0.4514 MDVDTLNASAADNCMDVMTMMMQMERFPEFCDPFYSNTTYSDDKQPILLGNSCTPSQTLMTNPSYSAAYVSNVIQKPVTPALQSDAISGILESTPHTPYHPSSVKKNSMAAMREMIFRMAVMQPIHIDPESIKPPKRRNVKISTDPQSVAARHRRERISERIRILQKLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGANRPLGISLPGTVNTNVSCSELFKGDHSCIGSMHMLR* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00126 239 SMART finulus 148 197 IPR011598 GO:0046983
Pte10g00126 239 Gene3D - 145 206 IPR036638 GO:0046983
Pte10g00126 239 Pfam Helix-loop-helix DNA-binding domain 152 191 IPR011598 GO:0046983
Pte10g00126 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 201 IPR036638 GO:0046983
Pte10g00126 239 FunFam BHLH transcription factor 145 207 - -
Pte10g00126 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 191 IPR011598 GO:0046983
Pte10g00126 239 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 46 210 IPR045843 GO:0003700|GO:0006355
Pte10g00126 239 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00126 Pte-Chr10 1191519 1192238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00126 24 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 58.696 5.42e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte10g00126 HLH 1.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00126 - - qsa:O6P43_033826 249.98