Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00120 AGCAAGGCTTCGAGAGATAGGACATCTTCCTTTGGTGAGGTCAAGTCATCTGCTGTAATTCGAGCAGAGAAGGTCATGTCTAATCTGGATCCTGGATATCCCAGTTTTGTGAAGACCTTGGTCAGATCAAATGTTGCTGGTTGTTTTTGGATGGGACTTCCTGGGTTGTTCTGCAAGAGCCATTTACCGAACAAGGATATAACAATGATATTAGAAGATGAAGCTGGTAAAGAATTCAAATCTAAATACATTGCACACAAGACAGGACTAAGTGCTGGTTGGAGACATTTTTCTGCGGTTCACAAATTGATGGAGGGAGATGCTTTAGTCTTCCAATTAGTGGAGCCTGAAAAATTTAAGGTTAGAGTTTTAAAAGTTATT 381 0.4016 SKASRDRTSSFGEVKSSAVIRAEKVMSNLDPGYPSFVKTLVRSNVAGCFWMGLPGLFCKSHLPNKDITMILEDEAGKEFKSKYIAHKTGLSAGWRHFSAVHKLMEGDALVFQLVEPEKFKVRVLKVI 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00120 127 Gene3D - 14 127 IPR015300 -
Pte10g00120 127 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 15 126 IPR044837 -
Pte10g00120 127 SUPERFAMILY DNA-binding pseudobarrel domain 29 125 IPR015300 -
Pte10g00120 127 Pfam B3 DNA binding domain 36 123 IPR003340 GO:0003677
Pte10g00120 127 ProSiteProfiles B3 DNA-binding domain profile. 36 127 IPR003340 GO:0003677
Pte10g00120 127 CDD B3_DNA 34 125 IPR003340 GO:0003677
Pte10g00120 127 SMART B3_2 36 127 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00120 Pte-Chr10 1109610 1110156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00120 6 126 B3 DNA Binding Superfamily AT3G19184 45.455 5.08e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte10g00120 B3 3.7e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00120 - - egr:104457276 186.037