Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00110 ATGGATGCAATTATAATTTCAATTTGGTCCTTTGACTTTTCAGATGAAAGGCTTAATGATATTGTTGGCAGTGCATATTATGTCGCTCCTGAAGTCCTACATAGGTCTTACAGTACAGAGGCTGATGCTTGGAGTATTGGTGTCATTGCTTATATTCTACTATGCGGCAGTCGTCCATTTTGGGCTCGAACTGAGTCTGGAATTTTCAAGTCTGTTTTAAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTTTATCTGCAGAAGCAAGAGACTTTGTTAAGCGACTATTAAATAAGGACCCCAGAAAAAGAATGTCTGCGGCACAGGCTTTGAGTCATCCCTGGATTAGAAACGATAACGTGAAAGTGCCCCTGGATATTCTTATATTCAAGCTTATGAAGTCATATATGCATTCTTCATCTTTGCGAAAAGCTGCTTTAATGGCTCTCTCCAAAACAGTAACTGCTGATGAGCTATTATATTTAAAGGACCAGTTTGCTCTACTTGAACCGAACAAAAATGGCACTATAAGCTTGGAGAATGTTAAGGAGGCATTGATGAAAAATGCAACAGATGTTATGAAGGAGTCGCACATCCCTGACTATTTGGCAGCACTTAATGCTTTACAATATAGAAGAATGGACTATGGTGAGTTCTGCGCAGCAGCATTGAGTGTTCATCAACTGGAGGCTCTGGATAGGTGGGAGCAACATGCACGCTGTGCCTATGACCTTTTTGAAAAGGATGGGAATCGGCCTATTATCGTTGAGGAACTGGCTTCGGAACTTGGACTGGGACCTTCTATTCCCGTTCATACAGTTCTTCATGATTGGATTAGACACACAGACGGAAAGTTGAGCTTCCTTGGATTTGTCAAATTGTTGCGCGGTGTTTCTAACCGGAGCCTCGCAAAAGCAAGATAG 930 0.4183 MDAIIISIWSFDFSDERLNDIVGSAYYVAPEVLHRSYSTEADAWSIGVIAYILLCGSRPFWARTESGIFKSVLKADPSFDEPPWPSLSAEARDFVKRLLNKDPRKRMSAAQALSHPWIRNDNVKVPLDILIFKLMKSYMHSSSLRKAALMALSKTVTADELLYLKDQFALLEPNKNGTISLENVKEALMKNATDVMKESHIPDYLAALNALQYRRMDYGEFCAAALSVHQLEALDRWEQHARCAYDLFEKDGNRPIIVEELASELGLGPSIPVHTVLHDWIRHTDGKLSFLGFVKLLRGVSNRSLAKAR* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00110 309 SUPERFAMILY Protein kinase-like (PK-like) 15 138 IPR011009 -
Pte10g00110 309 SUPERFAMILY EF-hand 145 298 IPR011992 -
Pte10g00110 309 ProSiteProfiles EF-hand calcium-binding domain profile. 159 194 IPR002048 GO:0005509
Pte10g00110 309 Gene3D - 157 226 - -
Pte10g00110 309 Gene3D Transferase(Phosphotransferase) domain 1 8 125 - -
Pte10g00110 309 Gene3D - 135 296 - -
Pte10g00110 309 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00110 309 SMART serkin_6 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00110 309 FunFam Calcium-dependent protein kinase SK5 28 123 - -
Pte10g00110 309 PANTHER SERINE/THREONINE-PROTEIN KINASE 11 283 - -
Pte10g00110 309 Pfam Protein kinase domain 16 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00110 309 FunFam CDPK-related kinase 1 153 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00110 Pte-Chr10 1035188 1037133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00110 3 305 EF-hand Containing Proteins AT3G50530 79.276 0.0 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte10g00110 Pkinase 2.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00110 K13412 - jre:109018972 530.406