Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00109 ATGGGGGCCTGTACTTCCAAGCCATCTACAGTCCTTTCATCCTCATCACTGGATAAGACTCATCTCCAACCCGCTAAACAGAAAACTTCTCGGGACAATTCTATCCCAGGTAGTGAGGGTGGAACTTCACAGTCTACGGACGCCGTTAATGTACAAAATCCTATAATAGAGAACGGCAAGAAATCTCCTTTCTTTCCTTTTTACAGTCCAAGTCCGGCTCACTATTTGTTCCCGAAGAAGTCGCCGGCGAGATCCCCGGCAAATGGGAGCTCCAACTCGACGCCGAAGAGGATTTTCAGACGGCCGTTCCCGCCACCGTCACCGGCGAAACATATACGAGCGTTGTTGGCGAGGAGGCATGGGTCAGTGAAGCCCAATGAGGCGACAATACCGGAGGGTGGTGAAGCTGAGGTAGAGACAGGGTTGGATAAGAGTTTTGGCTACTCCAAAAATTTTGGTAATAAGTATGAATTGGGCGATGAGGTTGGAAGAGGGCATTTCGGATATACTTGTGCTGCAAAGTTTAAGAAGGGTGAGCTTAAGGGTCAACAGGTAGCTGTCAAAGTCATTCCCAAAGCTAAGATGACCACAGCTATTGCCATTGAGGATGTGAGAAGGGAAGTAAAAATCTTGAGATCTTTGACTGGACATAAGAATCTAATACGGTTCTATGATGCATACGAAGATCAAGATAATGTATACATAATAATGGATTTATGTGAAGGAGGAGAGCTTTTAGACAGAATTCTTGCCAGGGGCGGGAAATACACAGAGGATGATGCAAAAACAGTCATGACACAAATACTCAATGTTGTTGCATTTTGCCACCTGCAGGGTGTCGTGCATCGTGATCTCAAACCTGAGAATTTCTTGTTCACGTCAAATGATGAGAACTCAGAGCTTAAGGCTATAGACTTTGGCTTGTCAGATTTTGTAAAACCAGGTTAA 948 0.4525 MGACTSKPSTVLSSSSLDKTHLQPAKQKTSRDNSIPGSEGGTSQSTDAVNVQNPIIENGKKSPFFPFYSPSPAHYLFPKKSPARSPANGSSNSTPKRIFRRPFPPPSPAKHIRALLARRHGSVKPNEATIPEGGEAEVETGLDKSFGYSKNFGNKYELGDEVGRGHFGYTCAAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRSLTGHKNLIRFYDAYEDQDNVYIIMDLCEGGELLDRILARGGKYTEDDAKTVMTQILNVVAFCHLQGVVHRDLKPENFLFTSNDENSELKAIDFGLSDFVKPG* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00109 315 MobiDBLite consensus disorder prediction 78 107 - -
Pte10g00109 315 PANTHER SERINE/THREONINE-PROTEIN KINASE 136 313 - -
Pte10g00109 315 Pfam Protein kinase domain 156 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00109 315 ProSitePatterns Protein kinases ATP-binding region signature. 162 188 IPR017441 GO:0005524
Pte10g00109 315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Pte10g00109 315 Gene3D Transferase(Phosphotransferase) domain 1 148 315 - -
Pte10g00109 315 SMART serkin_6 156 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00109 315 FunFam CDPK-related kinase 1 149 244 - -
Pte10g00109 315 ProSiteProfiles Protein kinase domain profile. 156 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00109 315 FunFam CDPK-related kinase 3 148 315 - -
Pte10g00109 315 SUPERFAMILY Protein kinase-like (PK-like) 153 313 IPR011009 -
Pte10g00109 315 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00109 Pte-Chr10 1032320 1035142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00109 1 315 EF-hand Containing Proteins AT3G50530 74.062 1.50e-163 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte10g00109 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00109 K13412 - cave:132186080 471.47