Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00108 ATGCAATGTGTGATGGATGGATGGATGGACATGAGAGAAGTAGAATCCTATATATCACATTACCTTCATAAGATTCCATTGGATCGTTGCAAGAAGAAGAGCACTCATGCTAACTTTATCCGTAATGTGACTGGTGTTGTTGGAACCAGTTGGCCTTTCTCTCACGCGAAGAGGCTCGCACGCCATAGAAAGGTTCGGCACATCAGCGACGGTAATGATTTACCTGATCGCAAGACGCAATCTGAATGCGCTGATGATGATATCTGTTTCAATTTGTCTCGCTCTCCTAGCGGTTACGACCGGTTAGTTGGACGTCAGTCATTATCATCGGCTTGTTCTACATCCAATGCTTCGGTGAGCCCCCAGCCCCTACCGTTGCCAGAGCTTGCAAGGAAGAAGGACGGAATTGACATTCGTCCGCCTTCTCCCAGCACAAGCAAAAGAGCCAAAGGTGTGGAGGAGCGGGAAAGATCAGTTGATGAATTTTCTAATGGTGTCACGCCCAGCATTCTGATTAAGAGTGTGTTCACAAACCAAGATTATGCAAGGAGAAAGATGGATAGTGCTGAAACAATGTCGCCTACGGGGATGGGGCAATCTAAAATGAGTACTTCTGAAGCCTGTAGCAACAACTTCTGGATCAATATCCCCACTAGGAGTGCTCCCTGTAGTCCTCCTTCGCTCAGTCCACAAGGAAGGATCAATATTGATGTATTGCCGTATTTTACAATTCCTCAATCAAATCATGTCTGGTCAGCTCCTGAAATGCCTGCCTCAGATATGATGGCAGGTCTTCCTCCACCTGCATTTTTTGATTTAGGGGCATTTAGTCCTGATAGTTCACCAGTTCACAGTCCACGTACAAGCAGAAGTCCAGCTCAATGCCCCAGGTGCCTTAGCAGTGCTTCATCGCCAGTGCATTCTAGAGTATCCCCAGAAACTACCCCAACACGACGTGAAAGTAATTCTTCATCAATTGTCCACCCATTGCCTCTTCCCCCTCCAGGATCATCCCTGTTTTCTCCTGGCTCATCCACACCTTCTCCAACTTCTTCCCAAGCTACACCAAAATTGGATGCTTTGTTCATGAAAAGCAAATGGCAGAAAGGAAAACTAATCGGACGTGGAACATTTGGAAGTGTCTATGTAGCAACTAACCGAGAAACTGGTGCTTTATGTGCAATGAAGGAAGTTGAGTTACTTCCTGATGATCCTAAATCTGCGGAATGTATAAAGCAATTACAGCAGGAAATTAGAGTTCTCAGCCACCTCAAACATCCAAATATAGTGCAATATTATGGCAGTGAAATAGTTGAAGATCGGTTTTATATATTTTTAGAATATGTCCATCCTGGTTCAATCAACAAATATGTCCGTGAGCATTGTGGTGCCGTAACAGAAGCTATAGTTAGAAGTTTCACTCGTCATATTCTTTCTGGGTTGGCTTACTTGCATAGCAAGAAGACCATACACAGGGACATTAAAGGGGCTAATTTGCTGGTTGATTCTACCGGGTTAGTTAAACTTGCGGACTTTGGGATGGCCAAACACTTGAATGGACAGGTAGCTGATCTTTCATTGAGGGGAAGTCCATACTGGATGGCTCCAGAGCTTATGCAAGCAGTGATGCAGAAAGATAACAGCTCTGACCTTGCTTTTGCTCTCGATATTTGGAGCTTGGGTTGTACAATCATTGAAATGTTCACAGGGAAGCCTCCTTGGAGCGAATACGAGGGAGCTGCAGCAATGTTTAAATTGATGAGAGACACCCCTCCAATACCTGAAGCATTGTCATTTGAGGGTAAAGATTTTCTGAACTGCTGCTTCATAAGAAATCCAGCGGAGCGGCCAACGGCTGTAACATTGTTAGAACATCGATTCTTGAAAAACTCGCACCTGGATACCCCATCTAGTTGCCAGCCACATGGACCGGCCCCTAAGCCCGAAAGATCTATATGA 1959 0.4507 MQCVMDGWMDMREVESYISHYLHKIPLDRCKKKSTHANFIRNVTGVVGTSWPFSHAKRLARHRKVRHISDGNDLPDRKTQSECADDDICFNLSRSPSGYDRLVGRQSLSSACSTSNASVSPQPLPLPELARKKDGIDIRPPSPSTSKRAKGVEERERSVDEFSNGVTPSILIKSVFTNQDYARRKMDSAETMSPTGMGQSKMSTSEACSNNFWINIPTRSAPCSPPSLSPQGRINIDVLPYFTIPQSNHVWSAPEMPASDMMAGLPPPAFFDLGAFSPDSSPVHSPRTSRSPAQCPRCLSSASSPVHSRVSPETTPTRRESNSSSIVHPLPLPPPGSSLFSPGSSTPSPTSSQATPKLDALFMKSKWQKGKLIGRGTFGSVYVATNRETGALCAMKEVELLPDDPKSAECIKQLQQEIRVLSHLKHPNIVQYYGSEIVEDRFYIFLEYVHPGSINKYVREHCGAVTEAIVRSFTRHILSGLAYLHSKKTIHRDIKGANLLVDSTGLVKLADFGMAKHLNGQVADLSLRGSPYWMAPELMQAVMQKDNSSDLAFALDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKLMRDTPPIPEALSFEGKDFLNCCFIRNPAERPTAVTLLEHRFLKNSHLDTPSSCQPHGPAPKPERSI* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00108 652 Gene3D Transferase(Phosphotransferase) domain 1 363 643 - -
Pte10g00108 652 SUPERFAMILY Protein kinase-like (PK-like) 346 644 IPR011009 -
Pte10g00108 652 FunFam Mitogen-activated protein kinase kinase kinase 5 364 646 - -
Pte10g00108 652 MobiDBLite consensus disorder prediction 281 327 - -
Pte10g00108 652 MobiDBLite consensus disorder prediction 341 355 - -
Pte10g00108 652 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 123 639 - -
Pte10g00108 652 Pfam Protein kinase domain 368 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00108 652 SMART serkin_6 367 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00108 652 ProSitePatterns Protein kinases ATP-binding region signature. 373 396 IPR017441 GO:0005524
Pte10g00108 652 MobiDBLite consensus disorder prediction 112 161 - -
Pte10g00108 652 MobiDBLite consensus disorder prediction 633 652 - -
Pte10g00108 652 MobiDBLite consensus disorder prediction 276 355 - -
Pte10g00108 652 ProSiteProfiles Protein kinase domain profile. 367 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00108 Pte-Chr10 1019013 1029217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00108 58 631 MAP Kinase Kinase Kinase AT5G66850 55.740 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte10g00108 Pkinase 5.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00108 - - qsa:O6P43_033798 703.36