Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00095 ATGTGGGATCTCAATGACTCGCCTGAGCAGAGAATATTTGATGATGAATCAGAAGAAGGGTGTTCTTCCCAGAAGATCTCGGTTGATGGAGACGACGATAAAGGCAAACGGGTTGGATCCGTTTCAAATTCAAGCTCGTCTGCTGTAATAGTAGAGAACGGATCAGATGACGAAGCTGATGCAGAGGGGAGCAGGCCGTTGAGCAAGCGAGACAGTAAGATATTCGGCTTCTCCATGGGCCTTGACGATCCTGTGGGCGGTGGACCACCAGTGACCAGGCAGTTTTTTCCCATGGATGATTTTGACCAAGCTGTTGCAACCAGTGGAGAGGGTGACGGTGCCGGCGGCCGCCACGACCCCGATTTCCCTCTTGCTCACTGGGTTGGTGTGAAATTCTGTCAATCAGACGCACACGTCATTGGAAAGCCACTCGAGGCGTTGCAGCAGCCTATGAAGAAAAGCCGCAGGGGGCCGAGGTCAAGGAGCTCGCAGTATAGGGGAGTTACTTTTTATAGAAGGACTGGCCGATGGGAGTCCCACATATGGGATTGCGGAAAACAAGTTTATCTGGGAGGTTTTGACACGGCACACGCAGCTGCTCGTGCATATGATCGGGCTGCCATTAAGTTCCGAGGCGTAGACGCAGACATAAACTTCAACATTGAAGATTATGAGGAAGACTTAAAACAGATGAGTAATCTCACCAAAGAAGAGTTCGTGCATGTTCTTCGTCGTCAAAGCACTGGATTCCCAAGAGGGAGCTCTAAATACAGAGGTGTAACCTTGCACAAATGTGGCAGATGGGAATCTCGAATGGGTCAATTTTTGGGCAAAAAATACGTGTATTTGGGACTATTTGATTCGGAAATAGAGGCTGCAAGAGCTTATGACAAAGCAGCTATTAAGTGCAATGGTAAAGACGCTGTGACAAACTTTGATCCAAGTATCTATGATGATGAGCTCAACCTAGACGCGTCTGGTGAAGCTGCTGATAATCAGAACCTCGATTTGAGTTTGGGTAATCCTAGTGCCAAGCACCATAAACCAGTGACTGAACATCATTCTTCTTTTCCATCTCAAACTGATTGGAGGAATGGGGGGGTATCAAGGCCTGAGGAGCAAACATGTCGAAGTGAAAACGTGGAAGGTCGTGTAAGAGATGGGTGCAATGAGACAGAAACCAGGAGACTTCTTAGTCAACCACACCTTCAGTCGTCAACCTTTAGTGATATGCAAAGATATGGTCACTGTATGAGGTCTATAGAGCCTCAACTGGTTCACAGTTTGCCACCAAATATTCATCCACATGCTCCGAACAATCCTATGCAGTTCCCGAGCAGCAGTAATGGAGGACGGATTGGAAATGATCTTGCACTGTCAATGGCAGATCAACAGTGGCAATTCCGACCTCCTCTTCTTTTTGCATCTGCTGCAGCATCATCAGGATTCCCACAGAATGTTAGACCTTCCCAATGTTGGCTGCAGAAAAATGGATTCAATTCTCTGATGAGACCCACTTGA 1521 0.4747 MWDLNDSPEQRIFDDESEEGCSSQKISVDGDDDKGKRVGSVSNSSSSAVIVENGSDDEADAEGSRPLSKRDSKIFGFSMGLDDPVGGGPPVTRQFFPMDDFDQAVATSGEGDGAGGRHDPDFPLAHWVGVKFCQSDAHVIGKPLEALQQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKCNGKDAVTNFDPSIYDDELNLDASGEAADNQNLDLSLGNPSAKHHKPVTEHHSSFPSQTDWRNGGVSRPEEQTCRSENVEGRVRDGCNETETRRLLSQPHLQSSTFSDMQRYGHCMRSIEPQLVHSLPPNIHPHAPNNPMQFPSSSNGGRIGNDLALSMADQQWQFRPPLLFASAAASSGFPQNVRPSQCWLQKNGFNSLMRPT* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00095 506 MobiDBLite consensus disorder prediction 1 69 - -
Pte10g00095 506 SUPERFAMILY DNA-binding domain 163 221 IPR016177 GO:0003677
Pte10g00095 506 PRINTS Ethylene responsive element binding protein signature 257 268 IPR001471 GO:0003700|GO:0006355
Pte10g00095 506 PRINTS Ethylene responsive element binding protein signature 295 315 IPR001471 GO:0003700|GO:0006355
Pte10g00095 506 MobiDBLite consensus disorder prediction 354 374 - -
Pte10g00095 506 ProSiteProfiles AP2/ERF domain profile. 256 313 IPR001471 GO:0003700|GO:0006355
Pte10g00095 506 MobiDBLite consensus disorder prediction 8 38 - -
Pte10g00095 506 Gene3D AP2/ERF domain 255 314 IPR036955 GO:0003700|GO:0006355
Pte10g00095 506 Gene3D AP2/ERF domain 163 222 IPR036955 GO:0003700|GO:0006355
Pte10g00095 506 CDD AP2 255 315 IPR001471 GO:0003700|GO:0006355
Pte10g00095 506 SMART rav1_2 164 226 IPR001471 GO:0003700|GO:0006355
Pte10g00095 506 SMART rav1_2 256 319 IPR001471 GO:0003700|GO:0006355
Pte10g00095 506 SUPERFAMILY DNA-binding domain 255 315 IPR016177 GO:0003677
Pte10g00095 506 Pfam AP2 domain 164 212 IPR001471 GO:0003700|GO:0006355
Pte10g00095 506 Pfam AP2 domain 255 304 IPR001471 GO:0003700|GO:0006355
Pte10g00095 506 ProSiteProfiles AP2/ERF domain profile. 164 220 IPR001471 GO:0003700|GO:0006355
Pte10g00095 506 CDD AP2 164 221 IPR001471 GO:0003700|GO:0006355
Pte10g00095 506 FunFam AP2-like ethylene-responsive transcription factor 255 315 - -
Pte10g00095 506 MobiDBLite consensus disorder prediction 332 384 - -
Pte10g00095 506 FunFam AP2-like ethylene-responsive transcription factor 163 222 - -
Pte10g00095 506 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 92 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00095 Pte-Chr10 915066 918942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00095 1 507 AP2-EREBP Transcription Factor Family AT4G36920 51.412 6.79e-132 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte10g00095 AP2 5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00095 K09284 - qsa:O6P43_033841 627.861