Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00093 ATGGAGGGTGACCACCTAGGAGGAGGCGTGGGAAGAGAAAGAGAGACATCTACGCGGACGAGAGCTGTAGATGGGGAGAGACGGTTCAAAGGGATAAGGATGAGGAAGTGGGGTAAGTGGGTCGCTGAAATTAGAGAACCCAATAAGCGTTCTCGGATTTGGCTTGGTTCTTATTCAACACCGGTCGCCGCAGCTCGGGCTTACGACACTGCTGTATTCTACCTCAGGGGTGCAAGCGCACGCCTCAATTTCCCTGAGCTATTGACAGGTGAAGGTGGCGGCGGCGGCGCTGTTGATGGCGATATCTCGGCGGCTACGATTAGGAAGAAGGCTACGGAGGTAGGAGCTAGGGTCGATGCGCTTCAAACGGCTCTGCATAGACACCGCCAAGCATCTTCGGTAGCAGAAAGCAGTTCATGCGGCAGCGGAGGCAATGGTGGAAGCGGGGAGAGAGGCTTCGTGGAACGGGTCGACTTGAATAAAGTACCCGAACCGGAAGAGTCAGAGTAA 510 0.5529 MEGDHLGGGVGRERETSTRTRAVDGERRFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGASARLNFPELLTGEGGGGGAVDGDISAATIRKKATEVGARVDALQTALHRHRQASSVAESSSCGSGGNGGSGERGFVERVDLNKVPEPEESE* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00093 169 MobiDBLite consensus disorder prediction 126 145 - -
Pte10g00093 169 FunFam Ethylene-responsive transcription factor 2 27 86 - -
Pte10g00093 169 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Pte10g00093 169 MobiDBLite consensus disorder prediction 1 24 - -
Pte10g00093 169 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 15 169 - -
Pte10g00093 169 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Pte10g00093 169 SUPERFAMILY DNA-binding domain 28 86 IPR016177 GO:0003677
Pte10g00093 169 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Pte10g00093 169 MobiDBLite consensus disorder prediction 154 169 - -
Pte10g00093 169 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Pte10g00093 169 MobiDBLite consensus disorder prediction 126 169 - -
Pte10g00093 169 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Pte10g00093 169 PRINTS Ethylene responsive element binding protein signature 67 87 IPR001471 GO:0003700|GO:0006355
Pte10g00093 169 Gene3D AP2/ERF domain 27 86 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00093 Pte-Chr10 904672 906385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00093 7 169 AP2-EREBP Transcription Factor Family AT5G67190 58.152 5.44e-57 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte10g00093 AP2 5.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00093 K09286 - qsa:O6P43_033843 217.238