Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00084 ATGAATTCAACAATATCGATCCTGGTAATCATTTGTACCAAAAATCAAAGTACCGCACCAATTGTTATGGAATTCTTTCTTGACATCGATTCCAGAAATTTCAAGCTATCAATTGCACCCCGTGAAGCGTCTTTTGCATTTGTAAATGCCATTGAAGTCTTTCAAGTCCCAACTAATTTCACATTAGATGAAGCTCCATTCATCAGTTCTGCCGGAATTCCAGGTAATAAGTACAAGGGTATACTTTCGCGGTTTTTACAGACAATTTATAGGATCAATGTCGGAGGAGCACCCATCACTGAAAATAGTGATACTCTTTGGAGAAAGTGGGACTTAGATGACCCTTATCTCATTAATCGAAACAACTCTCAAAATCTGCCGGGGAGTCCTGCTCATCAGATTCAAGATGATGGGCCTGTACTTAATGATTCAGACCTTGTGGCAGGAAACTCGAGTAAATATATTGCCCCACTTCGCGTTTATCAGAGTGCCAAAGTGATGCATTCGAGCTCCAGTAACTCCTCCAATTCGTCCAACATAACTTGGGTTTTTCCTGTCAGAAAGAATTCTAATTATCGTATCAGATTTCACTTTTGTAACATCATCCCTGAAGCACCTAATGATTTTCATTTCCAACTGTACATAAATAGCGACTCTCGCCCTCCTATCGATATAATGCCGTATTACATTGCTCGAGCACCTGTTAGCCCGTTTTACATGGATTTCGTTGTCGGCTCTGGTGATTCTCAAGCTCTAAACTTCAGCATAGGTCCTACTACGGATACGAATTATTTAATCAAGAATGCTTTTTTGAATGGGTTGGAAATCATGGAAATTATTAGTACACCAGGTTCGATTCCGCCTATGCCAAATGGAAACAACAGCCGTCTTCCTAAAGTGCTGGGCACAGCTCTCGGAGGTTTTGGCCTGATTTGCATTTTATTACTTCTGTCCTTTATGGGTGCGAAATTCTTGAAATCTAAGCCAGTTGAAGTTTCGGCGTGGTCACCTCTGCCCGTGACACATGGAGGAGTAAGTTCCCATAGCAGGACAACCATCCCTGGCTCTCCTATTTCTAATTTGCATCTTGGCCTGAAAATGTCTTTCTCCGAGATTCTTTTTGCCACAAATAATTTTGATGAAAAAAGGATAGTTGGTAAAGGTGGCTTTGGTTACGTATACAGTGGCATTCTTAGAGATGGCAGGAAAGTGGCTGTGAAAAGAAGTGATCCGGGTTCAAGACAAGGCCTTCCAGAATTCCAGACAGAGATCCTTGTGTTGTCGAAAATTCATCATCGGAATCTTGTCTCATTGATTGGTTATTGTGATGAAAGGTCTGAAATGATATTGGCTTATGAGTTTATGGAGAAAGGCACACTCAGGGATCACCTGTACGGTACAGACTTGCCTAGTTTGTCTTGGAAGCAGAGGCTACACATTTGTATTGGTTCCGCAAGGGGTCTGCAATACCTTCACAAAGGATCAGCTGGGGGTATAATTCATCGCGATGTCAAGTCCACTAATATATTGCTTGACGAAAACCATGTTGCTAAAGTTGCTGATTTTGGCCTTTCCAGAACAGGCCCCCTTGATCAAACATATGTCAGCACAAATGTGAAGGGCACATTTGGTTATCTTGATCCTGAGTACTTTAAGACCGAACAATTGACGGATAAATCTGATGTCTACTCATTTGGAGTAGTTCTTTTTGAAGTGTTATGTGCAAGGCCAGCTCTTGATCCAACGCTTCCAAGGGAGGAGGTAAACCTTGCTGAATGGGCAGTCCACTGCATGAAGAAAGGGCTACTTGAAGAGATCATTGATCCTTCTCTCAAGGATCAGATTGATCCCAATTCGCTCAGAAAATTTAGTGAGACTTCAGAGAGATGTTTGCAAGAAGATAGCTCAGAAAGGCCCACCATGAGTGATGTACTATGGGACCTTGAGTATGCGCTGCAGCTTCAGCAAAGCGCAAAGCAGAGAGAACCACACGAAGACAGCACAATTGATGCTTCAGACTCAATTCAATTGCCGAATGTTCGGCGTCTACCTTCACTCTCATCATTCACTGAAGTCGATAATACTGCTATTAGTGGAATATATGAAAACGATAGCACAGAAAATTCTGTTTTCTCTCAGTTGAGAGCTGAAGATGCCCGATGA 2163 0.4212 MNSTISILVIICTKNQSTAPIVMEFFLDIDSRNFKLSIAPREASFAFVNAIEVFQVPTNFTLDEAPFISSAGIPGNKYKGILSRFLQTIYRINVGGAPITENSDTLWRKWDLDDPYLINRNNSQNLPGSPAHQIQDDGPVLNDSDLVAGNSSKYIAPLRVYQSAKVMHSSSSNSSNSSNITWVFPVRKNSNYRIRFHFCNIIPEAPNDFHFQLYINSDSRPPIDIMPYYIARAPVSPFYMDFVVGSGDSQALNFSIGPTTDTNYLIKNAFLNGLEIMEIISTPGSIPPMPNGNNSRLPKVLGTALGGFGLICILLLLSFMGAKFLKSKPVEVSAWSPLPVTHGGVSSHSRTTIPGSPISNLHLGLKMSFSEILFATNNFDEKRIVGKGGFGYVYSGILRDGRKVAVKRSDPGSRQGLPEFQTEILVLSKIHHRNLVSLIGYCDERSEMILAYEFMEKGTLRDHLYGTDLPSLSWKQRLHICIGSARGLQYLHKGSAGGIIHRDVKSTNILLDENHVAKVADFGLSRTGPLDQTYVSTNVKGTFGYLDPEYFKTEQLTDKSDVYSFGVVLFEVLCARPALDPTLPREEVNLAEWAVHCMKKGLLEEIIDPSLKDQIDPNSLRKFSETSERCLQEDSSERPTMSDVLWDLEYALQLQQSAKQREPHEDSTIDASDSIQLPNVRRLPSLSSFTEVDNTAISGIYENDSTENSVFSQLRAEDAR* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00084 720 Gene3D Phosphorylase Kinase; domain 1 348 454 - -
Pte10g00084 720 PANTHER OS07G0166700 PROTEIN 366 655 IPR045272 GO:0004714|GO:0006468
Pte10g00084 720 CDD STKc_IRAK 385 649 - -
Pte10g00084 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Pte10g00084 720 SMART serkin_6 379 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00084 720 SUPERFAMILY Protein kinase-like (PK-like) 362 649 IPR011009 -
Pte10g00084 720 FunFam Receptor-like protein kinase FERONIA 455 670 - -
Pte10g00084 720 FunFam receptor-like protein kinase FERONIA 345 454 - -
Pte10g00084 720 Gene3D - 86 280 - -
Pte10g00084 720 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Pte10g00084 720 Pfam Protein tyrosine and serine/threonine kinase 382 645 IPR001245 GO:0004672|GO:0006468
Pte10g00084 720 ProSiteProfiles Protein kinase domain profile. 379 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00084 720 Pfam Malectin-like domain 17 278 IPR024788 -
Pte10g00084 720 Gene3D Transferase(Phosphotransferase) domain 1 455 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00084 Pte-Chr10 785272 787910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00084 14 721 Receptor kinase-like Gene Family AT2G23200 48.760 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pte10g00084 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00084 - - qsa:O6P43_033868 818.92