Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00067 ATGAGCTGCAACGGTTGCCGTGTTCTGCGAAAGGGCTGCAGCGAATCTTGTATTCTACGACCCTGTCTGCAGTGGATTGAAAGCCCCGAAGCACAGGGCCATGCCACCGTTTTCGTTGCTAAGTTCTTTGGCCGTGCCGGCCTCATGTCCTTCATCTCCAATGTTCCCGAAAATCAAAGACCTGCTTTATTTCAGTCACTGTTGTTTGAAGCCTGTGGAAGAACGGTCAACCCAGTGAACGGTGCAGTAGGGCTTTTGTGGACCGGAAACTGGCACGTCTGCCAAGCAGCTGTGGAGACCGTGCTTCGAGGTGGCGCTTTAAGCCCGATGCCGGAGCTCCTTGGCCTTGATATTCCGACTTCCTTCACCGATGAGGTCTCCGAGGCGGAAGTCACCTGTACGGACATATTGAGGCGACCTGATCTGAACCCTAAGTTTACAAGCTCCAAACAGTGCTCGACCAAAATACGCACCGAGAAACGAAAGCGATCGGATGAAACACTGCAGTTTCAGATGGCCGATCTCGATCTTCGGCTGACACCAAGCTTTGCGCCAAAACCTTCGATCTGTAACAAGCTTTACAACCCTGAAACCCATCGCCCAGGGACACCGTCGATGAACTCGGAGGAGTCGGGGACGACCACCGCTTGTTTGGATAGCGGTGTCGGAGATCAATCTGTCATCGCCAGAGATCCAAAGCTTCTCAACCTTTTCATCTGA 720 0.5278 MSCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISNVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGALSPMPELLGLDIPTSFTDEVSEAEVTCTDILRRPDLNPKFTSSKQCSTKIRTEKRKRSDETLQFQMADLDLRLTPSFAPKPSICNKLYNPETHRPGTPSMNSEESGTTTACLDSGVGDQSVIARDPKLLNLFI* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00067 239 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Pte10g00067 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 221 - -
Pte10g00067 239 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00067 Pte-Chr10 682663 685006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00067 1 240 AS2 family AT4G37540 56.175 4.62e-83 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte10g00067 LOB 3.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00067 - - qsa:O6P43_024565 350.132