Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00066 ATGGCCATCAGGCCCTTGAAGCTCTTCCGTCACAGTTTGGTTTCTCTGTTCCCTACTCACCCATTTCAATCCTATTCTCAACTTTTTCGCGTTCCCTCCTCATCTCAGTCACTGTCACACGTTTTCGTCGTCCGACTCATCGCTTCATCCGCCAATACATCGTTCTTAAATATCATCCATCGCTACAGCCAACTGCCCCCATCAACGTCTCGCAACCGCCCACAGTCGCTGGCTTCATCAGAAACCCTGGCGCAGAAGATTGGGAAATCAATACGCCGCCCTGGCGCTGCCTCCAAGGCGAGGATTTATGCAGACGTCAACGTCATCCGTCCAAAGGAGTACTGGGACTACGAGTCCCTTACCGTCCAGTGGGGGGAGCAAGATGATTACGAGGTGGTGAGGAAGGTGGGAAGGGGGAAATACAGTGAGGTGTTTGAAGGTGTCCATTGCACGAAAAATGAGAAATGTATTATCAAGATCCTCAAACCTGTGAAAAAGAAGAAGATTAAGAGGGAGATCAAAATACTGCAGAATCTTTGTGGAGCGCCCAACATTGTGAAGTTGCTAGATATTGTTAGAGACCAGCAGTCAAAGACCCCAAGCCTCATAACGGAATATGTGAATAACACTGACTTTAAAGTTCTCTATCCCACACTTTCGGACTACGATATTCGATACTACATCTATGAACTTCTGAAGGCATTGGATTATTGTCACTCACAAGGTATCATGCATCGAGATGTAAAACCACACAATGTAATGATTGACCACGAGCAGCATAAGCTACGCCTGATAGATTGGGGACTCGCAGAGTTCTATCATCCTGGAAAGGAATATAATGTCCGTGTAGCATCAAGATATTTCAAAGGACCTGAGCTTCTTGTTGATCTGCAAGACTATGATTATTCGTTAGATTTGTGGAGCCTAGGCTGTATGCTTGCTGGAATGATTTTCCGCAAGGAACCTTTCTTTTATGGACATGACAATTCTGATCAGCTTGTCAAAATAGCCAAGGTACTTGGAACAGATGAGTTAAATGCTTATGTTAATAAATATCGCATAGAGTTGGACCCAAATCTTGCAGCACTTGTCGGAAGGCACAGCAGAAAACCTTGGTCAAAGTTTTTTAATGCTGATAATCAGCATTTGGCTGTTCCAGAGGCCATTGATTTTGTGGACAAGTTACTACGATATGATCACCAAGAAAGACCAACAGCGAAAGAAGCAATGGCACATTCATACTTCAATCCTATCAGAAATGCAGAAAGTAGTAGAACTAGCTCCAGTTGA 1290 0.4426 MAIRPLKLFRHSLVSLFPTHPFQSYSQLFRVPSSSQSLSHVFVVRLIASSANTSFLNIIHRYSQLPPSTSRNRPQSLASSETLAQKIGKSIRRPGAASKARIYADVNVIRPKEYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTKNEKCIIKILKPVKKKKIKREIKILQNLCGAPNIVKLLDIVRDQQSKTPSLITEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQHKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMLAGMIFRKEPFFYGHDNSDQLVKIAKVLGTDELNAYVNKYRIELDPNLAALVGRHSRKPWSKFFNADNQHLAVPEAIDFVDKLLRYDHQERPTAKEAMAHSYFNPIRNAESSRTSSS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00066 429 FunFam Casein kinase II subunit alpha 207 418 - -
Pte10g00066 429 SUPERFAMILY Protein kinase-like (PK-like) 104 419 IPR011009 -
Pte10g00066 429 PANTHER CASEIN KINASE II SUBUNIT ALPHA 86 425 IPR045216 GO:0004674|GO:0006468
Pte10g00066 429 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Pte10g00066 429 CDD STKc_CK2_alpha 111 415 IPR045216 GO:0004674|GO:0006468
Pte10g00066 429 Gene3D Phosphorylase Kinase; domain 1 130 206 - -
Pte10g00066 429 Gene3D Transferase(Phosphotransferase) domain 1 207 415 - -
Pte10g00066 429 FunFam Casein kinase II subunit alpha 116 206 - -
Pte10g00066 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Pte10g00066 429 SMART serkin_6 130 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00066 429 Pfam Protein kinase domain 130 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00066 429 ProSiteProfiles Protein kinase domain profile. 130 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00066 Pte-Chr10 666867 672528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00066 128 415 Core Cell Cycle Gene Families AT3G48750 31.561 7.92e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Pte10g00066 Pkinase 2.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00066 K03097 - qsa:O6P43_024562 683.715