Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00063 ATGCGTAGATGCATGTACACCGAGATTGAAGAGACAGAACAACGAGGAGAAAAAGAAGGCATGGATAGCTCAGGGAGTTCGTTTTCTCTCTCTAGCCTCTTGTGCGAAGAACAAGAAGATAGCTTGTTAAAGGTTGAAGAAAGTTTAAACAATATTGTCGTTAACTCAATGAACCCACTTTACTTTCCTGACTTTGAAGATGAATACCTTGACATTTTGTTGGAAAAAGAGATAGGCTTTGGATCCAAAACTACTAGTCCATGTCATGGTACTGATAGTCATGATGGCGGCTCAAGCAACGGGAAGGAGCGGTTGATGTGTGCTCGATTGGATGCAATTCAATGGATTTTCAAAACCCGGGAATCATTTGGGTTCCAATTCCATACTGCTTATTTATCAGTGACTTATTTTGATCGGTTTCTTTCAAGGCGATTTATTAAAGATGGGGAAGTATGGGCTATCAGGCTGTTATCCCTGGCATGTTTATCTCTCGCAGCAAAGATGGAGGAGTGCACAGTGCCGATTCTATCTGATTATTCTCTTGACGATTATTACTTTGAGAATAAAGTTGTTCAGAGAATGGAACTTCTAATATTAAGCACTTTGGAGTGGAAGATGGGATCAGTAACTCCATTTGCCTACTTAAATTACTTGATTGAAAAGTTGGGAGGCCAATCTAGACTTCCAGTAATATTCCACAGAGCGGCTGAACTTATCATGGCAGCCGTCAGAGATATTGATCTGATGAATCATCGGCCATCTGTTATTGCCTGCGCCTCTGTATTGGCAGCCATTGATGGTCAACTGACAAAGAAAACATTGGAGCTCAGATTGGCAGCAATCTCGACATTGGGATCTATTGAATCTGAACATGTGCTTTCTTGCTATATTTCAATGCAAGAAATAGAAAGGGGATTAATCAGGACGCCTCAGTCAGTGTTATCTTCACATTTGTCGTCAACCCCTTTGAGCTCCAGTGAAGTTCCTGAGAACTCTTTTTCCAACTCAGCCGCTACTTGTGGCATTAAGAGAAGACTTGATTTTGGTGACAGTGATGAAAGTTGTCCAATGCAGAAATTTTATCGCAGTTAA 1092 0.4103 MRRCMYTEIEETEQRGEKEGMDSSGSSFSLSSLLCEEQEDSLLKVEESLNNIVVNSMNPLYFPDFEDEYLDILLEKEIGFGSKTTSPCHGTDSHDGGSSNGKERLMCARLDAIQWIFKTRESFGFQFHTAYLSVTYFDRFLSRRFIKDGEVWAIRLLSLACLSLAAKMEECTVPILSDYSLDDYYFENKVVQRMELLILSTLEWKMGSVTPFAYLNYLIEKLGGQSRLPVIFHRAAELIMAAVRDIDLMNHRPSVIACASVLAAIDGQLTKKTLELRLAAISTLGSIESEHVLSCYISMQEIERGLIRTPQSVLSSHLSSTPLSSSEVPENSFSNSAATCGIKRRLDFGDSDESCPMQKFYRS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00063 363 MobiDBLite consensus disorder prediction 1 20 - -
Pte10g00063 363 FunFam Cyclin-D5-1 104 207 - -
Pte10g00063 363 SUPERFAMILY Cyclin-like 58 206 IPR036915 -
Pte10g00063 363 Gene3D - 208 296 - -
Pte10g00063 363 PANTHER CYCLINS 67 301 IPR039361 -
Pte10g00063 363 SMART cyclin_7 114 200 IPR013763 -
Pte10g00063 363 Gene3D - 108 207 - -
Pte10g00063 363 Pfam Cyclin, N-terminal domain 108 206 IPR006671 -
Pte10g00063 363 Pfam Cyclin, C-terminal domain 209 303 IPR004367 -
Pte10g00063 363 ProSitePatterns Cyclins signature. 109 140 IPR006671 -
Pte10g00063 363 CDD CYCLIN_AtCycD-like_rpt2 209 299 - -
Pte10g00063 363 SMART Cyclin_C_2 209 331 IPR004367 -
Pte10g00063 363 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00063 Pte-Chr10 623835 626515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00063 29 289 Core Cell Cycle Gene Families AT4G37630 37.818 6.75e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00063 K18811 - qsa:O6P43_024555 318.161