Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00058 ATGGATACCTTGTTTAGGTTAGTCAGTCTTCAACAATCTGAACAATCCTTCAATTCAAGCAGGACCTCCAGCAGCTCTAGATCGTCCAGGCAAACACAATATCATCACTACCATCAACAAGACGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTCTCCTCGTCTTCTTCTAGGCACTACAATCCCTATCAGCCCCACCCTTCCACCACTACCATTACTACCACCCCAACCCCCACTACTCTCACTCCCACACATACAAACACCACAATCAGTACCCCCACCAACACCAGTGATCCATCCTTCTTCTCGCCATCAAGTGATTCCTTCAACTTCGATTTCTCTGGAAAGTGGGCTGGCGATATTCTCTTTGAAACCGCTCGTGCCATCGCTGATAAGAATAGCGCCCGCGTTCAACAACTCATGTGGATGCTCAATGAGCTCAGTTCTCCTTACGGTGACACGGATCAAAAGCTGGCTTCCTATTTCCTTCAAGCTCTGTTCAGCCGCATGACGGATTCTGGCCACCGTTGCTACCGTAGTCTGATTGAGGCATCGGAGAAAACATGTTCATTCGAATCAACCAGGAAGATGGTCTTGAAATTCCAAGAAGTCAGTCCTTGGGCAACCTTTGGTCACGTTGCTTGTAATGGTGCTATCTTGGAAGCGCTGGATGGTGAGCCAAAGTTGCACATAGTTGATATCAGCAACACGTACTGTACCCAATGGCCTACTTTACTGGAAGCACTGGCAACTCGCAGTGATGAAACACCACACCTCCGTTTAACCACAGTGGTAACCAGCAAGGCTGGTGGTTCAATGTCTGCTGTCCAAAAGGTCATGAAAGAGATAGGTAATAGAATGGAGAAATTCGCAAGGCTTATGGGCGTACCTTTTAAATTCAGTGTAGTTCACCATGTGGGTGATCTTTCTGAGCTGAACTTAGCCGACTTAAATATCAAGGAGGACGAAACTCTTGCTATTAACTGCGTGAACGCTTTGCATACGATCACAGCTGTCGGCAAGCAAAGGGACATGTTGATATCTATATTTAGAAGATTACAACCACGGATAGTAACTATAGTGGAAGAAGAAGCTGATCTTGATGTGGGTTACGATGGCTTTGAGTTTGTGAAGGGTTTTCAAGAATGCTTGAGATGGTTTAGGGTTTACTTCGAGGCTTTGGACGAGAGCTTTCCACGCACGAGTAACGAGCGTTTGATGCTTGAACGAGCTGCGGGACGGGCCATAGTTGACTTGGTGGCTTGTTCACCGTCCGAGTCAATCGAGCGCAGGGAGGTCGCGGCAAGGTGGTCACGGCGTTTGCATGGCGGTGGGTTTAGTCCAATGTCATTTAGTGAAGAAGTTTGTGACGACGTGAGAGCACTGCTTAGGAGGTATAGGGAAGGATGGGCAATGGCACAGTGCTCCGACGCCGGAATATTCTTGACGTGGAAGGATCAGCCGGTGGTGTGGGCCTGTGCATGGAGGACTTGA 1503 0.4797 MDTLFRLVSLQQSEQSFNSSRTSSSSRSSRQTQYHHYHQQDDEECFNFFMDEEDLSSSSSRHYNPYQPHPSTTTITTTPTPTTLTPTHTNTTISTPTNTSDPSFFSPSSDSFNFDFSGKWAGDILFETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRMTDSGHRCYRSLIEASEKTCSFESTRKMVLKFQEVSPWATFGHVACNGAILEALDGEPKLHIVDISNTYCTQWPTLLEALATRSDETPHLRLTTVVTSKAGGSMSAVQKVMKEIGNRMEKFARLMGVPFKFSVVHHVGDLSELNLADLNIKEDETLAINCVNALHTITAVGKQRDMLISIFRRLQPRIVTIVEEEADLDVGYDGFEFVKGFQECLRWFRVYFEALDESFPRTSNERLMLERAAGRAIVDLVACSPSESIERREVAARWSRRLHGGGFSPMSFSEEVCDDVRALLRRYREGWAMAQCSDAGIFLTWKDQPVVWACAWRT* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00058 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 102 492 IPR005202 -
Pte10g00058 500 MobiDBLite consensus disorder prediction 12 37 - -
Pte10g00058 500 ProSiteProfiles GRAS family profile. 112 499 IPR005202 -
Pte10g00058 500 MobiDBLite consensus disorder prediction 56 102 - -
Pte10g00058 500 MobiDBLite consensus disorder prediction 59 102 - -
Pte10g00058 500 MobiDBLite consensus disorder prediction 12 33 - -
Pte10g00058 500 Pfam GRAS domain family 124 499 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00058 Pte-Chr10 586833 588994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00058 1 499 GRAS Transcription Factor Family AT4G37650 63.396 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte10g00058 GRAS 2.1e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00058 - - qsa:O6P43_033912 764.607