Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00037 ATGGCTGGTCTGGATTTAGGTACTGCTACTCGCTTTGTACACAATCTTGACAGATCAGACTTGCACCTTCAGCCACATCCACCGCAGCGCCAACAAGATCAGCAGCCTAATTCAGAAGATGATCATAACCAAAGGTCGCAGTTCTCATCTGGCGATCAAGACGGTTCCCGCCAAGGTCTTGAGCTCGTCTCCATCACTTCGGCCAGCTACGGTGATGTGGTCGCACGCCGTCCCCGAGGTCGACCATGCGGATCAAAAAACGGACCCAAACCACCGGTCATAATAACAAGAGAGAGCCCCAACACCCTCAGAGCTCATATTCTTGAAGTGGGCAATGGATGCGACGTCTTCGACTGCGTGGCTACCTATGCCAAGCGTCGGCAACGTGGGATCTGCATCCTCAGCGGCAGTGGTACAGTCACTAACGTTAGCTTGAGGCAGCCGTCTGTTCCGGGAGCCGCAGTTATACTGCACGGAAGGTTCGAGATACTTGCTTTGTCGGGATCGTTTCTGCCACCTCCTGCACCTCCCGATGCAACGAGCCTGACGATATTCTTAGCTGGCGGACAAGGACAAGTTGTTGGCGGGAGCGTAGTGGGTGAGCTGATTGCAGCAGGGCCGGTCGTCGTGATTGCAGCGTCTTTCACTAACGTCGCATATGAGAGATTGCCTCTTGATGAGCAGGAAGAAGAACCTCAGATGCATCCACCTTGTCAGAGTTCCGGTGGCGGCGGCGAAAATGACCCATTGCCCGACCCATCTCCGGGGCTTGACTTCTTCAATCTGCCGCTGAATATGCAGAATGTTGAGATGGCTGTGGATGGATGGGCAGGGAGCTCAGGTGGCCGTTCATCTTTTTGA 861 0.5424 MAGLDLGTATRFVHNLDRSDLHLQPHPPQRQQDQQPNSEDDHNQRSQFSSGDQDGSRQGLELVSITSASYGDVVARRPRGRPCGSKNGPKPPVIITRESPNTLRAHILEVGNGCDVFDCVATYAKRRQRGICILSGSGTVTNVSLRQPSVPGAAVILHGRFEILALSGSFLPPPAPPDATSLTIFLAGGQGQVVGGSVVGELIAAGPVVVIAASFTNVAYERLPLDEQEEEPQMHPPCQSSGGGGENDPLPDPSPGLDFFNLPLNMQNVEMAVDGWAGSSGGRSSF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00037 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 37 243 IPR014476 GO:0003680
Pte10g00037 286 ProSiteProfiles PPC domain profile profile. 100 237 IPR005175 -
Pte10g00037 286 MobiDBLite consensus disorder prediction 74 98 - -
Pte10g00037 286 MobiDBLite consensus disorder prediction 20 58 - -
Pte10g00037 286 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 229 - -
Pte10g00037 286 Gene3D - 103 233 - -
Pte10g00037 286 CDD DUF296 104 187 IPR005175 -
Pte10g00037 286 FunFam AT-hook motif nuclear-localized protein 103 231 - -
Pte10g00037 286 MobiDBLite consensus disorder prediction 41 58 - -
Pte10g00037 286 MobiDBLite consensus disorder prediction 225 261 - -
Pte10g00037 286 Pfam Plants and Prokaryotes Conserved (PCC) domain 104 217 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00037 Pte-Chr10 401992 402852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00037 1 287 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 63.226 1.80e-96 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00037 - - jre:108994023 390.963