Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00010 ATGCTAATCTCTACCGCCTCCTCCTTCAAATTCAGTGGCTTTTGTGATACCACGACTCTACACACTAACGCTGTTCGCACTTCACAACACTCGACCGGTTCTACTCTTCGCATTAGGTTTAGGTTTAAGCTTACGGTCACCGCCACCCCGAACATGAGCTCCACTTCCGCATTGCCTGGCCGTCTGTTCCAGCTCAAAGTCGATCCTCTTACCGGCAATTCCGAGTGGATAGTTATCGAAGAAAAAGATGAAGATGACCAAGTTGAGAGCTTTACCACAAGTTTCCAGAAATCCGTTTTGGCTAATACCTCTTATTTGGACATGCTCAATGATTCTGCCAGAAACAGAGCATTTCGTCTAGCCATTGACAAAACCGTCACCAGACCTTGCCATGTGCTTGATATCGGTGCTGGCACTGGATTACTCTCTATGATGGCTGCACGCGCTATGAGCTCTCGGGACCCTGCAATGTCTAAAGGGACAGTAACTGCTTGCGAGTCTTACCTTCCGATGGTGAAGTTGATGAAGAAAGTTCTTCGCCTCAATGGGATGGAGACCAAAATTAGAGTCATCAACAAGCGCTCTAACGAACTGGAAGTTGGCATCGATATTCCTCAGCGTGCAGATGTGCTTGTAAGTGAAATACTGGACTCAGAGTTATTGGGTGAGGGGCTCATACCGACACTGCAGCATGCCCATGACAACTTGTTGGTCGAGAATCCTTTGACAGTACCGCACCGAGCAGTTATTTACGGCCAGCTGGTTGAAAGCGCATTCTTGTCGACGCTACATGATTTACACGGAAACGAGGCTATGGCACCTGACGGCGTTCGTCTTGTTCCACCAAGACTGGATAAGATTTTAAGGGTCAAACAGCAGCAACATCCCATGCACTGTGATGGAATAACAGAGGAAATTAAGCTGGTAATTTTTATACTTTCGAGAAAAAAAGCTTCATTCATCAAACCCAGGTCATTGTTTTACTCAAAAACGATTCCTCAGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGACAGTCATGGAGAGACTGAGATTCGCATAAAGGCAATTGACAGTGGCAGAGTTCATGCTGTGATCTCTTGGTGGATAATTCAACTTGATCGTGAAGGAACAATCTTCTATTCCACTGCCCCAATATGGACAAGGTCATCAGCTGTCCCGAGCTCTAGGGACTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCGGGAAAAGGTGTTTCTATATGTAATCATGAAGAAATTAATCTACATGCTGTTCACACTGAGACGACTATCCTTTATGATCTGAATATCCAAGTTTCTCGTAATGAACTTGTACACCATGGCCTGCTGGCTGGGAATCTGGAGCTCATACTATCACCTGAAAGAATTGCAATTTATGGAAACATAGAGTGGAGGCTTGCTATGTTGATAGCTATGAAAAAAGCTTTGCAGGAAAAAGATCACTCTTCATGTTTGGTTGTAGATGATAGTGTTTTCTTACCACTGCTTATAAGACATCTATCACAAACAACACATGTAATCTCGTTATTCCCTGGGCTAAGGGACAAAGGAATTCGTTATCTGGAGGCTGTTGCTCATGAGAATGGTTTTGCAGTTCATCATATAGAATTTATCAGTAAAAAGGTGAAATGTTTATCCATTGACGACTTGCACCAGAAGAAGGTTGACCTCTTGGTAGCTGAACCATTCTACTGCACAAATCCTGGAATGCTTCCATGGGAGAACCTTCGATTTTGGAAGGAACGCAGTTTTCTTGACCCTCTTCTCACTGAAGATGCTACGATAATTCCATGTAAAGGAATACTTAAAGCTTGCGCTATGTCTCTTCCTGATCTGTGGAATAGCCGTTGCTGCTTGAGTAATATTGAAGGTTTTGACCATTCAGTTGTAAACACCACATTAGGGGGCTGTGGCCATTCGCCTGCGGAAGAATACAGTCTTTGCCTTCCGTATTTTATCTGGCAATGTGGGGAATTTAAGGAGCTTAGTGGGACATTAACACTCATGGAGTTCGATTACTCGACAGTAATCAGCATTTGTCATGGAGAAGTCAAGTTTGAATTTACCAAGCCCGGAACGTGTCATGGATTCGTAATGTGGATTGATTGGGTGATTGATTCCGGGAATTCCATTGTGATCTCCACTGGTCCATATAATCGATTCTGGAAGCAGGGAGTAAAGCTTTTGGCGACACCTGTAGAGGTGGATTGGTCAAAAAACGGTGGTGGGTGTTGCTCTGCAATTCTCAAAGCAACCTTCGATCCCGTAAGGGGTGAACTCTTAGTAGGACACGATTTTTCAAGACAGCTCGTCTCCTGA 2367 0.4415 MLISTASSFKFSGFCDTTTLHTNAVRTSQHSTGSTLRIRFRFKLTVTATPNMSSTSALPGRLFQLKVDPLTGNSEWIVIEEKDEDDQVESFTTSFQKSVLANTSYLDMLNDSARNRAFRLAIDKTVTRPCHVLDIGAGTGLLSMMAARAMSSRDPAMSKGTVTACESYLPMVKLMKKVLRLNGMETKIRVINKRSNELEVGIDIPQRADVLVSEILDSELLGEGLIPTLQHAHDNLLVENPLTVPHRAVIYGQLVESAFLSTLHDLHGNEAMAPDGVRLVPPRLDKILRVKQQQHPMHCDGITEEIKLVIFILSRKKASFIKPRSLFYSKTIPQLSEPFKIFEFDFWKRPDSHGETEIRIKAIDSGRVHAVISWWIIQLDREGTIFYSTAPIWTRSSAVPSSRDWCDHWKQCVWFVPGKGVSICNHEEINLHAVHTETTILYDLNIQVSRNELVHHGLLAGNLELILSPERIAIYGNIEWRLAMLIAMKKALQEKDHSSCLVVDDSVFLPLLIRHLSQTTHVISLFPGLRDKGIRYLEAVAHENGFAVHHIEFISKKVKCLSIDDLHQKKVDLLVAEPFYCTNPGMLPWENLRFWKERSFLDPLLTEDATIIPCKGILKACAMSLPDLWNSRCCLSNIEGFDHSVVNTTLGGCGHSPAEEYSLCLPYFIWQCGEFKELSGTLTLMEFDYSTVISICHGEVKFEFTKPGTCHGFVMWIDWVIDSGNSIVISTGPYNRFWKQGVKLLATPVEVDWSKNGGGCCSAILKATFDPVRGELLVGHDFSRQLVS* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00010 788 Gene3D - 617 784 - -
Pte10g00010 788 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 534 753 IPR029063 -
Pte10g00010 788 Gene3D - 247 453 - -
Pte10g00010 788 Gene3D Vaccinia Virus protein VP39 464 613 IPR029063 -
Pte10g00010 788 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 537 751 IPR025799 GO:0016274|GO:0018216
Pte10g00010 788 FunFam Protein arginine N-methyltransferase 7 463 613 - -
Pte10g00010 788 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 84 445 IPR025799 GO:0016274|GO:0018216
Pte10g00010 788 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 105 433 IPR029063 -
Pte10g00010 788 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 449 788 IPR025799 GO:0016274|GO:0018216
Pte10g00010 788 Gene3D Vaccinia Virus protein VP39 97 246 IPR029063 -
Pte10g00010 788 FunFam Protein arginine N-methyltransferase 98 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00010 Pte-Chr10 94540 100395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00010 107 251 C2H2 Transcription Factor Family AT3G12270 31.818 7.46e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00010 K11438 - qsu:111983087 945.651