Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01672 CTGTAGTTAGAATGGGAGAAGAAAATAAGAAACATGAAAGCGTATAACAAGTACAAAACTGAAAAGAAAAAAAGTCGTTCGTTTTATTTGGTCTCCTCTACGGGAGGAACTCAATTTTTGCCTTTCCCACCCGATCTCCCCAGTCACCTGCTCTCCTTCTATCCAGGGTTGTTTTTTTCTGGTGGTTTAATGTATGATTCTGATGCTGAGGAAATAACAAGATTAGAAGCTTTTCTTTACCTTGAAAGATGTTGGAAGGTGGTGCAAAATTCCCTGGAATAATAGACCTGAACAAACACAATGATAACTACTATGATTTCTCTCAAGGATTTTATCATAAGCTTGAGGGCACCAATATGTCAATTGACAGCATTGGGAGCTTGCAAACAAGTAATGGTGGAGGATCTGTTGCAATGTCCATTGATAATAGCAGTGTTGGGTCCAATGATTCCCATACTCGCATATTGAACCACCAAGGGTTGCAAAGGCGCACCAATGATAATTACTCAATTGCACATAGTGTCAATAATCGAGGAAGAGTCACACATGCTTTGAGTGACGATGCTTTGGCTCAAGCTCTAATGGACACTAGTTCCCCAACTGAGGGGCTCGACAATTTTAATGAGTGGACAATTGATTTGAGGAATCTTAGTATGGGTGAGGCTTTTGCTCAAGGAGCTTTTGGGAAACTCTACAGAGGTGCTTACAATAATGAAGATGTTGCTATCAAAATCTTGGAGAGGCCTGAAAATGATCCAGCAAAGGCTCAATTGATGGAACAACAGTTTCAGCAAGAGGTGATGATGCTGGCTACATTAAAGCATTCAAATATAGTTCGTTTTATTGGTGCATGCCATAAGCCAATGGTATGGTGTATTGTCACTGAATATGCCAAAGGGGGTTCAGTTCGGCAATTTTTAATGAAGCGGCAAAACCGATCAGTGCCCCTCAAATTGGCTGTCAAACAAGCTTTGGATGTTGCACGGGGGATGGCATATGTTCATGGCCTTGGATTGATCCACAGGGACTTGAAATCTGATAATCTTTTGATTTTTAGTGACAGATCAATTAAAATTGCTGATTTTGGAGTTGCCCGGATTGAGGTGCAAACTGAAGGAATGACACCTGAGACTGGAACATACCGTTGGATGGCTCCGGAGATGATTCAGCACAGGCCTTACACACAAAAGGTGGATGTATATAGCTTTGGGATCGTTTTATGGGAACTCATCACTGGAATGCTTCCATTTCAGAACATGACAGCAGTACAGGCAGCATTTGCAGTTGTGAACAAAAATGTTCGCCCAATCATACCAAATGACTGCTTGCCTGTTCTCCGTGAGATCATGACAAGATGCTGGGATCCCAACCCTGATGTTAGACCACCATTTACTGAAATTATAGGAATGCTTGAGAACGCAGAGACTGAGATAATGACAACTGTTCGGAAGGCCCGTTTTAGGTGTTGCATGACGCAACCAATGACTGCAGACTGATTCTGGGAAAACAAATGAGTGGTAGAACGTAGACTGATAATTCGGAGGTAACATGAGACTCAGGTAGTTAAGGGTGACTATATAATAGCTGTGTATGTGTGCTTAATTTCTTTCTTAAGAAGAAAATGTATTAACTGCAAACCTTCCGATTGTTTGGTTCCTACTTACTATCTGTTTCTGAATTTGTAAGGAGATTGTGTGTAATACTTGCATGAACTACAGTTATGTATAGCTCTGAAAGCAAAATCGAGTGAGATAATAGACGAAAACTTTGTTGTGTACGTACGTACTTACGGGACTATTAGGATTTGTCTCCTAAAATAAATGGGAAACAAGCTTATAAACACTGGAGGTCCTATGTTAAAGTGGGAGCGTGCAACCG 1878 0.41 MLEGGAKFPGIIDLNKHNDNYYDFSQGFYHKLEGTNMSIDSIGSLQTSNGGGSVAMSIDNSSVGSNDSHTRILNHQGLQRRTNDNYSIAHSVNNRGRVTHALSDDALAQALMDTSSPTEGLDNFNEWTIDLRNLSMGEAFAQGAFGKLYRGAYNNEDVAIKILERPENDPAKAQLMEQQFQQEVMMLATLKHSNIVRFIGACHKPMVWCIVTEYAKGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFSDRSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKNVRPIIPNDCLPVLREIMTRCWDPNPDVRPPFTEIIGMLENAETEIMTTVRKARFRCCMTQPMTAD 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01672 415 PRINTS Tyrosine kinase catalytic domain signature 296 306 IPR001245 GO:0004672|GO:0006468
Pste9g01672 415 PRINTS Tyrosine kinase catalytic domain signature 315 337 IPR001245 GO:0004672|GO:0006468
Pste9g01672 415 PRINTS Tyrosine kinase catalytic domain signature 212 225 IPR001245 GO:0004672|GO:0006468
Pste9g01672 415 PRINTS Tyrosine kinase catalytic domain signature 359 381 IPR001245 GO:0004672|GO:0006468
Pste9g01672 415 PRINTS Tyrosine kinase catalytic domain signature 250 268 IPR001245 GO:0004672|GO:0006468
Pste9g01672 415 FunFam serine/threonine-protein kinase HT1 217 410 - -
Pste9g01672 415 ProSiteProfiles Protein kinase domain profile. 134 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01672 415 Gene3D Phosphorylase Kinase; domain 1 123 216 - -
Pste9g01672 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Pste9g01672 415 Gene3D Transferase(Phosphotransferase) domain 1 217 411 - -
Pste9g01672 415 CDD STKc_MAP3K-like 141 388 - -
Pste9g01672 415 SUPERFAMILY Protein kinase-like (PK-like) 116 388 IPR011009 -
Pste9g01672 415 FunFam Serine/threonine-protein kinase isoform 1 125 216 - -
Pste9g01672 415 Pfam Protein tyrosine and serine/threonine kinase 135 387 IPR001245 GO:0004672|GO:0006468
Pste9g01672 415 SMART serkin_6 134 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01672 415 PANTHER SERINE-THREONINE PROTEIN KINASE 59 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01672 Pste-Chr9 17260478 17268491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01672 24 415 MAP Kinase Kinase Kinase AT2G24360 77.863 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pste9g01672 PK_Tyr_Ser-Thr 8.9e-66 CL0016