Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01660 CCCTTGCCAACTCCTAAGGTATGTCCTTCTTTTCTTCCCTCGTAGAAGATGGTTGAATTGTATGATGCAAGCTAACTTGATTGTGTCTAACACTAACAGGTAAGAGAGAGTAATTGGTGGTTAAGAATGGTGGAGAAGGCCAAGAGAAAGGAAGAGGTGGTTACCCGAGAGTACACCATCAACCTCCACAAGCGCCTCCATGGCTGCACATTTAAGAAGAAAGCTCCGAAGGCTATCAAGGAGATTAGGAAGTTTGCCCAGAAGGCGATGGGGACAAATGATGTGAGGGTGGATGTGAAGCTGAACAAGTACGTGTGGAGCCAGGGAATCAGGAGTGTTCCTAGGAGAATTAGGGTTAGAATTGCTCGCAAGAGGAATGATGACGAAGATGCCAAGGAAGAACTATACTCTCTTGTCACCGTTGTTGAGATCCCTAAGGATGAGCTCAAAGGCTTGGGCACCAAAGCTATTGATGACGAGGATTGATCTTTTCATATGTAGTTTTTTCTTTCTGCGACTCAGTCTTGTCTTTTTCAGATTCTACTCCTATTTTTCTTTGGAATTTTGTTGAGACGTAATGTGGTTTTATAATATCAATTTAGTTTTTGTTGTCTTTGTGTTGGGTCCTTGTTCTTGGATATGAGATATTGTTTGTGACCGTGGAAATTTTAGATTGGAATTAGTCGTGATGATATGGTATAAATTTGAACTAGTTTCTCGGCAATTATGGATTGCCCTTGGTAGCTTTCAAAACATTAGTTGCCCCAACAAAAAAACTGTG 781 0.4149 MVEKAKRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKYVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKDELKGLGTKAIDDED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01660 119 SMART Ribosomal_L31e_2 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pste9g01660 119 Pfam Ribosomal protein L31e 10 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pste9g01660 119 CDD Ribosomal_L31e 8 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pste9g01660 119 ProSitePatterns Ribosomal protein L31e signature. 53 67 IPR020052 GO:0003735|GO:0005840|GO:0006412
Pste9g01660 119 SUPERFAMILY Ribosomal protein L31e 10 91 IPR023621 -
Pste9g01660 119 PANTHER 60S RIBOSOMAL PROTEIN L31 4 118 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pste9g01660 119 Gene3D - 7 119 IPR023621 -
Pste9g01660 119 FunFam 60S ribosomal protein L31 5 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01660 Pste-Chr9 17078168 17079144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01660 1 119 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 79.832 8.39e-67 195