LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste9g01655	ATGGGTCGGCGAAAGAACAACAACAACAATCAGTGTTCGTCTAGCAAAGGAGATACTGACATGAATAACCACGTTCGCTTTGAAGATGCAGTTGAAACTGTCGATGAGAGTTCCAACCTCGACCAATCAATGTGTGACATCGACGAATCCGATGATAAAACCAGCGCTGATTACTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAAATGTTGAAGGACACTGTAAGAACTAAGACGTACCAAAATGTTATTTATCAAAATAAGTTTTTGCTAAAGAATAAAGTAGTTCTTGATGTGGGTGCTGGAACTGGGATCTTATCACTATTTTGTGCCAAAGCAGGGGCAGAACACGTTTATGCAGTTGAGTGCTCCCACATGGCTGACATGGCAAAGGAGATTGTTGAAGCTAATGGTTACTCTAATGTTGTAACTGTTTTGAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTGCTAAAGTTGACATAATTATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGTGATAAATGGCTTGTGGATGGTGGAGTTGTTCTGCCAGATAAAGCATCCCTCTATCTCACTGCCATTGAAGATGCTGACTATAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAACAAGCCATAATGGAGCCTCTTGTTGACACAGTTGACCAGAATCAGATTGCTACAAACTGCCAGCTACTCAAGACAATGGATATCTCAAAGATGGCTCCTGGAGATGCTTCATTCACAGCACCTTTTAAGCTTGTAGCTGAACGGGATGACTACATTCATGCCCTTGTTGCATATTTTGATGTGTCATTTACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGCCCAAGATCAAGAGCTACACATTGGAAACAAACAGTCTTGTACCTGGAAGATGTCTTGACCATTTGTGAGGGGGAGACAATTGTGGGGAGCATGACTGTTGCTCCTAATAAAAAAAATCCTCGGGATGTTGATATAATGCTCAAGTATTCATTGAATGGAAGGCGATGCAATGTTTCAAGGGTTCAGTACTACAAGATGCGTTGAACCTGATTCATTGGGCCTTGCAGGCTTTTCTATTGCTTTAATATGTGTAAGATTTTAACAATTGCCGCTTCTATTTTTGAAATAGAGGCTGTCTTTCTCAATGAATGTAACTTGTTTGCTATTTAATTTGAATTATTTCTCATAATTGCTCAATTATGTTCTCTATGTAATGATAAAAATTGAAATCTATTTATTGTTTACAAAATTCTCCACGTAATGTGTAACTAATATTGCATTTATGTACAAAT	1382	0.3792	MGRRKNNNNNQCSSSKGDTDMNNHVRFEDAVETVDESSNLDQSMCDIDESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLLKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVEANGYSNVVTVLKGKIEEIELPVAKVDIIISEWMGYFLLFENMLNSVLYARDKWLVDGGVVLPDKASLYLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMAPGDASFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQTVLYLEDVLTICEGETIVGSMTVAPNKKNPRDVDIMLKYSLNGRRCNVSRVQYYKMR	377

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste9g01655	377	Pfam	Ribosomal protein L11 methyltransferase (PrmA)	90	168	-	-
	Pste9g01655	377	MobiDBLite	consensus disorder prediction	1	20	-	-
	Pste9g01655	377	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	62	376	IPR029063	-
	Pste9g01655	377	FunFam	Blast:Protein arginine N-methyltransferase 1	201	377	-	-
	Pste9g01655	377	ProSiteProfiles	SAM-dependent methyltransferase PRMT-type domain profile.	56	357	IPR025799	GO:0016274\|GO:0018216
	Pste9g01655	377	Gene3D	Vaccinia Virus protein VP39	47	199	IPR029063	-
	Pste9g01655	377	FunFam	probable protein arginine N-methyltransferase 1	47	199	-	-
	Pste9g01655	377	MobiDBLite	consensus disorder prediction	1	23	-	-
	Pste9g01655	377	CDD	AdoMet_MTases	98	198	-	-
	Pste9g01655	377	Gene3D	-	201	377	-	-
	Pste9g01655	377	PANTHER	PROTEIN ARGININE N-METHYLTRANSFERASE	28	364	IPR025799	GO:0016274\|GO:0018216

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste9g01655	Pste-Chr9	17021469	17024429	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste9g01655	59	340	C2H2 Transcription Factor Family	AT3G12270	40.461	1.60e-67	222