Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01647 GTGAAGAGTGCAGAGCTAACTGATGATGATATATAGCACCCAAGATATGTTTGTCAAAAAGTGAAAAATGGGCAGAAAGTGCTCACATTGTGGAAATATAGGCCATAATTCCAGGACCTGCGGATCTTTGAGAGCAAGTTTTGTAGGAGTTGGAGTTCGTCTCTTTGGAGTTCAGCTTGACACATCAACCTCTTCTTCTAGATCTCTTAGCATGGATTCCTTGCCCTCATCATCTGATGACCATTCTGATAAAACCTCTGGTGTCTATCTGTCAGATTCAGACTGCCTCATTGTTCCACCACAAGAGAGGAAGAAAGGAGTGCCATGGACAGAAGAAGAGCATCGAACATTCCTTGTTGGACTTGAGAAGCTGGGAAAAGGGGACTGGAGGGGTATCTCTAAACACTATGTCACTACAAGAACACCAACACAAGTCGCTAGTCATGCTCAGAAATACTTTATTCGCCTTGCAACTATGAATAAGAAAAGAAGACGTTCAAGTCTTTTTGACTTGGAGGGTTGCGGCATCACAGGTGATTTAGTTTCTACTGAAATGGAGAAGCTTAAGGATGTCTCCTTTTCATTAGAGGAAACCAAATCAAATGAGGAGAAAGATAGAGATGATCATTGTGATCCCAAGATGAAATCTCCATCAAATAACAATGCAGCAGTTCCGGATCTGGAGCTCACTCTGTCAGTTCCCAAGGGTAAGCCTAAGACCCTGCAACAAACAAATTCATCCACCGATTCCTTCCTTCTTAGCCCAATTAGCGTCACTTGAAGCCTTGCTTCTTGTCTCTCAAGTGTCAACCACAAGATCTTCTATCACTTCACACACTTTTTTCTTCTTGCTGTTAATATTGTTACTCATTAAACAAGCCCTAATCTTGTCACATCAAGCACATCTCTTTCTATCACTGCAAATTAGTTCAATCTTTTCACCCGAATTATTAATCAACCATATATCAAAATTTGTA 977 0.4094 MGRKCSHCGNIGHNSRTCGSLRASFVGVGVRLFGVQLDTSTSSSRSLSMDSLPSSSDDHSDKTSGVYLSDSDCLIVPPQERKKGVPWTEEEHRTFLVGLEKLGKGDWRGISKHYVTTRTPTQVASHAQKYFIRLATMNKKRRRSSLFDLEGCGITGDLVSTEMEKLKDVSFSLEETKSNEEKDRDDHCDPKMKSPSNNNAAVPDLELTLSVPKGKPKTLQQTNSSTDSFLLSPISVT 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01647 237 ProSiteProfiles SANT domain profile. 87 135 IPR017884 -
Pste9g01647 237 MobiDBLite consensus disorder prediction 42 64 - -
Pste9g01647 237 MobiDBLite consensus disorder prediction 171 237 - -
Pste9g01647 237 Gene3D - 85 137 - -
Pste9g01647 237 Pfam Myb-like DNA-binding domain 86 131 IPR001005 -
Pste9g01647 237 CDD SANT 86 131 IPR001005 -
Pste9g01647 237 SMART sant 83 133 IPR001005 -
Pste9g01647 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 135 IPR017930 -
Pste9g01647 237 ProSiteProfiles Myb-like domain profile. 79 131 IPR001005 -
Pste9g01647 237 PANTHER TRANSCRIPTION FACTOR KUA1 3 199 - -
Pste9g01647 237 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Pste9g01647 237 SUPERFAMILY Homeodomain-like 80 135 IPR009057 -
Pste9g01647 237 MobiDBLite consensus disorder prediction 214 237 - -
Pste9g01647 237 FunFam transcription factor MYB1R1 85 136 - -
Pste9g01647 237 NCBIfam myb-like DNA-binding domain, SHAQKYF class 82 133 IPR006447 GO:0003677
Pste9g01647 237 MobiDBLite consensus disorder prediction 171 192 - -
Pste9g01647 237 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01647 Pste-Chr9 16950151 16951290 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste9g01647 Myb_DNA-binding 2.5e-12 CL0123