Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01639 GAGAGTAAAATAGAAAGGGCAGTGGGAGTGGGGAAGGAAGGTCAACTGAAAAGTGAAGTGGAAGAAAGAGGTGTCTAATCGGGTGCGGCATGAGTGAGGCATTTGGGATTGGAGAAAGCAAAAGTGTCTGGGCATTGTAGGGGGCAAAAGAAACAAGGCTTGAGCAATGGAACAACAATAGCCTGGGCTTGCAATTGCAATATGCAATATGCAATGGGAGAAACGAGAGGAATGAAGGAGCAGGGTGAGGCTGCCTCAGGTTCAGGTTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGAGTCCGCTCCCTCCTCCCAAGAGAAGAAGAGCATAATAAACCCGGAGCTGTGGCAAGCCTGTGCTGGGCCTTTGGTTAACCTGCCCCCCTCCGGCACTCACGTGATATACTTCCCTCAGGGTCACAGCCAACAGGTTGCTGCCTCTCTCAACAAAGATGTCCACTCTCATATTCCCAACTATCCCAATCTTCCCTCCAAGTTACTCTGTCTCCTTCACAATCTCACTTTGCATGCTGATCCCGAAACAGATGAAGTATACGCTCAGATGACTCTTCAACCCGTTCCTTCTTTTGACAAGGACTCTCTTCTGAGATCAGATCTTGCTCTCAAGTCTACCAAGCCCCAACCCGACTTCTTCTGCAAACACCTCACCGCCAGTGATACAAGCACTCACGGCGGTTTCTCTGTTCCTCGTCGTGCTGCCGACAAGATTTTTCCTCCTCTTGATTATTCTTTGCAACCTCCTGCACAAGAACTTGTCGCCAGGGATTTGCACGATACCGTTTGGACATTCCGCCACATATACCGTGGACAACCCAAACGTCACTTGCTTACCACTGGCTGGAGTTTATTTGTCAGTGGAAAGAGGCTCTTTGCTGGAGACTCTGTTCTGTTTATAAGAGATGAAAAGCAGCAGCTTCTTTTGGGTATCAGAAGAGCCAACCGCCAACCTACCAATATCTCCTCATCGGTACTTTCAACTGACAGTATGCACATTGGAATTCTTGCTGCCGCGGCTCATGCAGCTGCAAACAATAGCCCCTTCACCGTCTTTTATAATCCTAGGGCCAGTCCTTCAGAATTTGTCATTCCTCTAGCCAAGTACTACAAGTCTGTGTACAGTCACCAACCGTCTCTTGGCATGCGTTTCCGCATGATGTTTGAAACTGAAGACTCTGGAACAAGAAGGTATATGGGTACAATCACAGGCATCAGTGATTTGGATCCTGTGCGATGGAAAAACTCTCAATGGCGTAATTTGCAGGTTGGTTGGGATGAGTCAACTGCTGGAGAAAAGCGAAGCAGGGTCTCAATCTGGGAAATTGAACCAGTGACTGCTCCATTCTTCATCTTTCCACCTCCATATTTTAGATCCAAGAGGCCAAGACAACCAGGAATGCCTGATGATGAATTATCTGATTTTGATAACGTTTTCAAGCGGACAATGCCTTGGCTTGGTGGTGATGATATGTTCATGAAGGATTCCCAAGGTCTTCCTGGCCTGAGCTTAGCTCAATGGATGAACATGCAGCAAAATCCTGCACTGGCTAGCTCATTGCAGCCAAATTATGTACCATCCTTATCAGGATCTATTTTGCAAAATATTCCTGGAGCTGATATTTCTCGTCAGCTGGGATTTTCTGCCCCACAGATTTCTCCATCAAACAATGTTGCCTTTAATACTCAGAGGCTACTTCAGACTGCTCAACAACTGGATCACATTCAGAAGCTACCATCTATTTCTAGCACATTGGGAACAGTCCTGCCACCACAGCAACGGTTAGGTGATATCACTCAACAGCCAAGGCAGAACATGGCAAATCAAACTAACCCACAGGGTCAAGTTCAGGCCCAGCTCTTGCATCCTCAGAGCATTGTCCAAACCAACAACATGCTTCAACATCAGCAACCATCCATTCAAAATCATCAACTTCATAGAAGCCTTGCCCAGAGCCCATCACAGCAGCAGACAATTATAGGTCAGAATCAACAACAAAATTTGATCCAGTCTCCTATGCCTGATCATGTTCAACAAGTACAGTTGTCCGATAATCACATTCAGATGCAATTGTTACAAAAACTTCAACAGCAAAAACAAACGCTCTTGGCACAGCAAACTGCATTGCAGCAGCCCACTCAGCTTCCTCAAATCCAGGATCAGCAGAGACAGCTTTTTGATAAAACACATAACTTGTCTAGAGCACTAATACCTAGTCAAGGACTGGAAGTTCCTTCTACACTTCAAAATTCACTTCCTGAGGCTAATTCTATGTCAAAGACTAATTTCCAGAACAATATCCGATTCTCTCAGATGCCCAAGCTTCAACAACAGCAACCTGGCATGCTTTCTGAAATGTCTGGCCATATGGCACTTCTCCCTACCCCTGCAACTAACCAACTTTCTACTGCTGGAAGTAGTATGCAGACTGGAGCAGCTGGTGCAGGGCAATCTGTTATTACCGATGATGTTCCGTCTTGCTCCGCCTCACCTTCTACAAATAACTGTGCCAATCCACTTCCATCATTGATAAATTCTCGATTCCAGAGAAGCACACTAGTAGGGGATGACATGGCTCAATCTGCTGCAACAATCTTGAGTTCAAGTGCTTTAGAAACTATGTCATCAAATGCAAACTTGTTGAAAGAATTACAGCCAAAGTCTGAAGTTAAGCCTTCTCTGAATATTTCAAAAATTCAGAATCAAGGGCATTTTGGTCCTCAGACGTTCTTGAATGGTAATGCTGTCCAAACAGATTGTTTGGATACATCATCTTCTACTACATCAGTTTGCCTTTCACAGAGTGATGCTCATATGCATCAAAATAACAACCCATTATCTTACAATCCACAGTCTATGTTCTTTAGAGACAACTGTCAAGATGGGGAAGTTCAGGCTGATGCTAAGAACAACATTCAATATGGCAATAACATTGATAGCCAAATGGGAATGCCACTGAATCCAGATTCCCTTTTAACCAAAAGCACATTGGGGTTAGGGAAGGATTTGTCTAATAATTTTTCTTCAGAAGGCATGCTTGGTAATTATGAAAATAACAGAGATGCTCAGCAGGAACTTTCATCTTCAATGGTTTCACAGACATTTGGAGTCCCTGATATGGCCTTCAATTCAATTGATTCCACAATAGATGATAGTAACTTCTTGAATAGGGGTCCATGGGCTTCACCACCAGCACCTCCACCGCCACCTCTGCCACCAGCACAGTTTCAGAGGATGAGGACATATACCAAGGTATATAAACGCGGAGCTGTGGGAAGGTCCATAGACATAGCACGGTATTCAGGTTATGAGGAGCTTAAACAGGATCTAGCCCGTAGATTTGGCATAGAGGGACAGCTGGAAGATCGGCAAAGGATAGGTTGGAAACTCGTCTATGTAGATCATGAGAGCGACGTTCTTCTAGTGGGAGATGACCCTTGGGAGGAGTTTGTGAACTGTGTCCGGTGTATTAAAATACTTTCTCCTCAAGAAGTGCAACAAATGAGTTTGGACGGAGATTTTGGCAATGGTGGCCTTCCAAATCAAGCCTGTAGCAGCTCTGACGGTGGGAATACTTAAGGGAGCCCCGTAATACGCTAACTATTCTTCCCATATTGGTATCTTAAGAGACTATTTCTATTTTCTGGGAGATAGATTATTTCCTAATTCCCAAAGGGCGGTTATTGTGCCACTGGGGATGTTTGTGTAGGCATCAGAACTTCAAAAGCAAAGTTTTGCAGTTTGAAAGATGTTTTGTCTCTGTTCTGGACATGCAAATTTGAAGAGCCAAATGGTGGAGAAGCGAACTGCCACAAGTACATTCGGAGCACCTGGACAAAACTAGACGTGTTTCAAGCCATAGATATGTTGTTGTAATGTTAAAAAAAGAATTGTTCTCGAATTGATCAGAAATATTGAACTCTATTATAGAAAGGAAGGTTTAATATTGAGCGGTAATTTTGAATGTATAAAGTCTTTAGCTTTATTTTTTCTTTTAGAGAAATTTCTTTGTAAACGCTAGGCAACTAGATTTTGCGGATGCTTTCACGATCTTTCCATCCTTCGGGACACCTTAGTACTAGACGAGATGGCTGTGAAGTAGAGAAACTTCAAATGTTGTAAGTCAAAGTAGATACTGTTGCATATTGCTTGAAGCGTAAGTACTAAAACTATGTAGGTTTTGTGAACTGTAAAGGAGTTCGATCAATTACCA 4234 0.4393 MQYAMGETRGMKEQGEAASGSGSGSGSGSGSGSESAPSSQEKKSIINPELWQACAGPLVNLPPSGTHVIYFPQGHSQQVAASLNKDVHSHIPNYPNLPSKLLCLLHNLTLHADPETDEVYAQMTLQPVPSFDKDSLLRSDLALKSTKPQPDFFCKHLTASDTSTHGGFSVPRRAADKIFPPLDYSLQPPAQELVARDLHDTVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSTDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFIFPPPYFRSKRPRQPGMPDDELSDFDNVFKRTMPWLGGDDMFMKDSQGLPGLSLAQWMNMQQNPALASSLQPNYVPSLSGSILQNIPGADISRQLGFSAPQISPSNNVAFNTQRLLQTAQQLDHIQKLPSISSTLGTVLPPQQRLGDITQQPRQNMANQTNPQGQVQAQLLHPQSIVQTNNMLQHQQPSIQNHQLHRSLAQSPSQQQTIIGQNQQQNLIQSPMPDHVQQVQLSDNHIQMQLLQKLQQQKQTLLAQQTALQQPTQLPQIQDQQRQLFDKTHNLSRALIPSQGLEVPSTLQNSLPEANSMSKTNFQNNIRFSQMPKLQQQQPGMLSEMSGHMALLPTPATNQLSTAGSSMQTGAAGAGQSVITDDVPSCSASPSTNNCANPLPSLINSRFQRSTLVGDDMAQSAATILSSSALETMSSNANLLKELQPKSEVKPSLNISKIQNQGHFGPQTFLNGNAVQTDCLDTSSSTTSVCLSQSDAHMHQNNNPLSYNPQSMFFRDNCQDGEVQADAKNNIQYGNNIDSQMGMPLNPDSLLTKSTLGLGKDLSNNFSSEGMLGNYENNRDAQQELSSSMVSQTFGVPDMAFNSIDSTIDDSNFLNRGPWASPPAPPPPPLPPAQFQRMRTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHESDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNGGLPNQACSSSDGGNT 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01639 1132 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 45 1109 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pste9g01639 1132 MobiDBLite consensus disorder prediction 1000 1015 - -
Pste9g01639 1132 FunFam Auxin response factor 1015 1109 - -
Pste9g01639 1132 Gene3D - 151 254 IPR015300 -
Pste9g01639 1132 Gene3D - 317 388 - -
Pste9g01639 1132 SMART B3_2 153 255 IPR003340 GO:0003677
Pste9g01639 1132 Gene3D - 1015 1109 - -
Pste9g01639 1132 ProSiteProfiles B3 DNA-binding domain profile. 153 255 IPR003340 GO:0003677
Pste9g01639 1132 MobiDBLite consensus disorder prediction 1 44 - -
Pste9g01639 1132 MobiDBLite consensus disorder prediction 18 44 - -
Pste9g01639 1132 SUPERFAMILY CAD & PB1 domains 1037 1098 - -
Pste9g01639 1132 ProSiteProfiles PB1 domain profile. 1020 1104 IPR000270 GO:0005515
Pste9g01639 1132 FunFam Auxin response factor 317 388 - -
Pste9g01639 1132 Pfam Auxin response factor 279 362 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pste9g01639 1132 MobiDBLite consensus disorder prediction 576 601 - -
Pste9g01639 1132 Pfam B3 DNA binding domain 153 254 IPR003340 GO:0003677
Pste9g01639 1132 SUPERFAMILY DNA-binding pseudobarrel domain 143 282 IPR015300 -
Pste9g01639 1132 MobiDBLite consensus disorder prediction 993 1015 - -
Pste9g01639 1132 FunFam Auxin response factor 151 255 - -
Pste9g01639 1132 CDD B3_DNA 152 244 IPR003340 GO:0003677
Pste9g01639 1132 Pfam AUX/IAA family 1019 1105 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01639 Pste-Chr9 16829915 16835851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01639 37 497 B3 DNA Binding Superfamily AT1G19220 71.613 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pste9g01639 B3 4.2e-18 CL0405