Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01637 ATGACGGAAATAAGAGACGGGTATAAAATTCCAAGAAACTGGGTTGGTGATCCATGTGAGCCAAAGAGCTACTCCTGGGAAGGCTTAAAATGCAACTACAGCACTTCATTTCCTCCTCGAATTATATCTTTGAACATAAGTTCAAGCGGTTTGAGTGGAGATATAAATTCTGCCATTTCCAATCTCTCCTCGTTGGAATCTTTGGACTTGCATAACAATAGCTTAACTGGAGCTATCCCTCAGTTTTTGGAAGACTTGAAATCCCTTAAATATTTGGATTTAAAGGGAAATCATTTTTCAGGTTCCGTTTCTACCACTCTTTTAGAAAGATCAAGAGCCGGATTACTCACATTGAGGGTCGATGATCAAGAACGGAACAATAAAACCAAAAAAATTGTTATTCCTATAGTGGTAGCAATATCAGTTTTAGTTATATTGGTTGTTTTCATTCTCTTTTGGAAACTTAGAAGAAATGAACGATCAGATGAGGAAATTAGTATGCTCAACAAAGGAGGAAAAACCGTAGCAACGAAGAACTGGCAGTACTCATATTCGGAGGTCTTGGAGATCACCAACAACTTTGAAACGGTCATTGGTAAGGGAGGATTTGGAACTGTGTACAGTGGTCAGATGAAAAATGGCAAAGAAGTTGCAGTCAAGATGCTTTCTCCATCATCATCTCAAGGGCCAAAGGAATTTCAGACTGAGGCTGAGCTTTTGATGACAGTTCACCACAAAAATTTGGTATCCTTCGTTGATGGAAATTCACATTGCCTGAGTTGGGAAAGGAGAATACAGATAGCAATCGATGCTGCAGAGGGGTTGGATTATTTACACCATGGATGCAAGCCACCTATAATACACAGGGATGTAAAGTCAGCCAACATTCTTTTAAGTCAAGACTTTGAAGCTAAGATAGCAGATTTTGGCCTCTCCAGGGAGTTTAGGAAAGATAACCAAAATCAGCAATCTACCGTGATTCATAGTGATGCTACGAACGAAAACTCTGCAGTAATGGGCACAACAGGGTACCTTGACCCAGAGTACTACAAATTGGGGAGCCTGAATGAGAAGAGTGACATCTATAGCTTTGGAATTGTTCTACTGGAATTGATCACAGGTCGGCCAGCAATAATAAAGAGCGACTCAATAATGCACATACTGGAGTGGATAAGACCTGAATTTGAAAGAGGAGATTTGAGTAAAATATTAGATCCAAGGCTCCAAGGAAAATATGATGATAGCTATGGCCGAAAAGCTTTAGGGATAGCAATGGCATGCTCTGCATCAACCTCCATTCAGAGACCTACAATGAGTGTTGTGATAGCAGAGCTAAAACTCTGCTTCAAATTGGAATCCCCCGCTCATACTCAAACATTTGTGGACCCTCCAAAACTAGTCTACAACGATGTTTACAGTTCATCTGAAGCATTTTCTTATCACTCTGAATCTGTCACCTATCCTTTCCCTAGATAGTCACTTCATTCAACTGTAAATTTTTATGAAACCATGTATTCAAATTTTACCTTTGTTGTAAAATTATATTATAATATTAATTGAAGGATCCATTTCCCTACAAACAATTTT 1587 0.39 MTEIRDGYKIPRNWVGDPCEPKSYSWEGLKCNYSTSFPPRIISLNISSSGLSGDINSAISNLSSLESLDLHNNSLTGAIPQFLEDLKSLKYLDLKGNHFSGSVSTTLLERSRAGLLTLRVDDQERNNKTKKIVIPIVVAISVLVILVVFILFWKLRRNERSDEEISMLNKGGKTVATKNWQYSYSEVLEITNNFETVIGKGGFGTVYSGQMKNGKEVAVKMLSPSSSQGPKEFQTEAELLMTVHHKNLVSFVDGNSHCLSWERRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSQDFEAKIADFGLSREFRKDNQNQQSTVIHSDATNENSAVMGTTGYLDPEYYKLGSLNEKSDIYSFGIVLLELITGRPAIIKSDSIMHILEWIRPEFERGDLSKILDPRLQGKYDDSYGRKALGIAMACSASTSIQRPTMSVVIAELKLCFKLESPAHTQTFVDPPKLVYNDVYSSSEAFSYHSESVTYPFPR 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01637 491 FunFam Lectin-domain containing receptor kinase A4.3 243 462 - -
Pste9g01637 491 Pfam Protein tyrosine and serine/threonine kinase 194 252 IPR001245 GO:0004672|GO:0006468
Pste9g01637 491 SUPERFAMILY L domain-like 23 108 - -
Pste9g01637 491 Gene3D Ribonuclease Inhibitor 2 113 IPR032675 -
Pste9g01637 491 Gene3D Phosphorylase Kinase; domain 1 153 247 - -
Pste9g01637 491 SMART serkin_6 192 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01637 491 PANTHER OS07G0107800 PROTEIN-RELATED 1 449 - -
Pste9g01637 491 ProSiteProfiles Protein kinase domain profile. 192 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01637 491 Pfam Leucine rich repeat 43 99 IPR001611 GO:0005515
Pste9g01637 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Pste9g01637 491 Gene3D Transferase(Phosphotransferase) domain 1 248 461 - -
Pste9g01637 491 ProSitePatterns Protein kinases ATP-binding region signature. 198 220 IPR017441 GO:0005524
Pste9g01637 491 FunFam Leucine-rich repeat receptor-like kinase 1 127 - -
Pste9g01637 491 SUPERFAMILY Protein kinase-like (PK-like) 178 445 IPR011009 -
Pste9g01637 491 Pfam Protein kinase domain 264 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01637 Pste-Chr9 16820495 16826948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01637 4 448 Receptor kinase-like Gene Family AT2G28970 45.436 1.43e-132 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pste9g01637 Pkinase 1.2e-23 CL0016