Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01635 GCCATGGGAAGGGCTCCATGCTGTGACAAATCTAACGTGAAAAGGGGACCTTGGTCTCCTGATGAAGATGCCACCCTCAGAAACTACCTCGAGAAACATGGCACAGGTGGTAACTGGATTGCTCTCCCCAAAAAAGCAGGCCTTAAGCGTTGTGGGAAGAGCTGTCGTCTAAGATGGCTGAACTACCTCAGGCCTCATATTAAGCTTGGAGGTTTCACCGAAGAGGAAGACAAAATCATCTGCACCCTTTATGATACCATTGGAAGCAGGCAAGTCTATTATTTTTTACATATGAACGGGCACTGTTTATCTGTATTATTCAATATGTGGTCCCTTATAGCAGCTCAATTGCCTGGGAGAACTGACAATGATGTGAAAAATCACTGGAACACCAAGCTAAAGAAAAAGTTCTTGGCAGGAAACACCAGTGTTCCCACTAGCAACAATGGCACTTTCAGCAATACTAGTTACTCTTATCAATTCTCATCTTTTACTCTTCCACCTCAAGTTGAGGCCCTTGTCTTGGATCAAAAACAGAACTCCATTTGGTTTGACTCCTACAATGTTTTGGATTTGGAACAAACATTAATTCCTGTTCCTCTTCCAATGCCTGATCAGGAATTAGAAGCAGCTTTTAATACTGGGAGCAGTTGTAGTGCACCACCTGTTAACCAAATTTCAATGCTTCCCAATGCAGCTTCCTTAGCACAGCAGAATAAACATAGTACACAATGGTTTGGTTATGACTATGCAAGTGAAGATGATCCAAATTTGCTTGAGTTTGTGCTTAATGATCTACTGAATCATGGATTTGCTTCTGAAGACAAAAGCAGCCAAGTTGGTCCACCATCTGGTTAA 858 0.4231 AMGRAPCCDKSNVKRGPWSPDEDATLRNYLEKHGTGGNWIALPKKAGLKRCGKSCRLRWLNYLRPHIKLGGFTEEEDKIICTLYDTIGSRQVYYFLHMNGHCLSVLFNMWSLIAAQLPGRTDNDVKNHWNTKLKKKFLAGNTSVPTSNNGTFSNTSYSYQFSSFTLPPQVEALVLDQKQNSIWFDSYNVLDLEQTLIPVPLPMPDQELEAAFNTGSSCSAPPVNQISMLPNAASLAQQNKHSTQWFGYDYASEDDPNLLEFVLNDLLNHGFASEDKSSQVGPPSG 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01635 285 FunFam Transcription factor RAX3 8 69 - -
Pste9g01635 285 ProSiteProfiles Myb-like domain profile. 10 63 IPR001005 -
Pste9g01635 285 PANTHER OS09G0431300 PROTEIN 2 206 - -
Pste9g01635 285 SMART sant 68 135 IPR001005 -
Pste9g01635 285 SMART sant 14 65 IPR001005 -
Pste9g01635 285 Pfam Myb-like DNA-binding domain 72 131 IPR001005 -
Pste9g01635 285 Pfam Myb-like DNA-binding domain 15 63 IPR001005 -
Pste9g01635 285 Gene3D - 71 136 - -
Pste9g01635 285 CDD SANT 17 63 IPR001005 -
Pste9g01635 285 CDD SANT 72 133 IPR001005 -
Pste9g01635 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 137 IPR017930 -
Pste9g01635 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 67 IPR017930 -
Pste9g01635 285 ProSiteProfiles Myb-like domain profile. 64 133 IPR001005 -
Pste9g01635 285 SUPERFAMILY Homeodomain-like 12 129 IPR009057 -
Pste9g01635 285 Gene3D - 7 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01635 Pste-Chr9 16798179 16799361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01635 2 139 MYB Transcription Factor Family AT5G57620 68.116 3.21e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste9g01635 Myb_DNA-binding 1.4e-08 CL0123