Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01628 AAGAAAGGTGTAATACTAGTAGGGTAGGGTAGAGGAGAAGAGAGAGGCTGGACTTTGAGCTTTAATGAGAAAAAAACCAACCGGGTTTTCTTTCTTTCTATCCTGTTTCTTCGCTTCTCTTTTTTCCTCTCTCTCATAAACCGCCTACATACATGCACTTCTTAAAGGTTCCTTTGTTGATAATTTTGGAGAAGTTTATGTTTTGATGGATCTGAATCAGCTCTAGGACTTTGCTGTACTATAGAGAAGAAACACGGACATGCTCAGTTGTGGACTGTTGCATAAAAAGGGAGTTGCAATAGTATTTGAAGGCATCTGGTTTGATCAAGAGAGATAACACACACGCACAGAATCGCTCACACACACGCACTCAGCACACGTCAGGATGAGTAAGATCAGCAACTTGAGTTCTGTAAGCAGTTCTGATCTCATAGATGCCAAGCTTGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGCCCCGGTTGCGGACACAAGTTTGAAGGGAAGCCGGACTGGCTAGGCCTGCCCGCCGGTGTGAAGTTTGATCCCACAGACCAAGAACTAATAGAACATCTTGAGGCCAAAGTGGAGGCAAAGAACATGAAATCACACCCTTTGATAGATGAGTTCATTCCCACTATTGAAGGAGAAGATGGAATTTGTTATACCCATCCAGAGAAACTTCCAGGAGTAACAAGAGACGGGTTGAGCAGGCACTTCTTCCATAGACCTTCAAAGGCTTACACAACTGGGACAAGAAAGAGGAGAAAGATTCAAAACGAATGTGACTTGCAAGGTGGAGAAACCCGGTGGCACAAGACTGGTAAGACCAGGCCAGTGATGGTGAATGGAAAACAAAAGGGCTGCAAGAAAATTCTTGTCCTCTACACCAACTTTGGAAAGAACAGGAAACCCGAGAAAACCAACTGGGTGATGCACCAATACCATTTGGGGCAGCATGAAGAAGAGAAAGAGGGAGAGCTTGTGGTGTCAAAGATATTCTATCAGACACAGCCAAGGCAGTGCAACTGGTCAGATAGAAGTGCCACAACTGGTGAAGGCAGTGGAGAACCTAACAACAGTAGTAGAAGGGACAGTGGAAGTGGAAGTTGTTCTTCTAAAGAAATTGTTACTCACCGAGATGAGATGTCTGCTGTTGTTGGTGTCCCTCCAATCACAAGTTTCACTCATCATCCCTTGGATATTCACCAGATAAAACCTGATCACTTTAGCTTCATCCCTTTCAGGAAAAGCTTTGATGAGGTTGGAATAGGAGAGGCTTCTACAACAAGAGAAGTAGTGCAAGCATCAGGTTCATGTGAAGAAGTGCATGAACGGCATCATGAGCATCATCATCATCAACACCATCAACAACATGCTCATCATCAGATTTCAAACTCAGCTTTTCATATCAGTAGGCCGTCACATCCCATCTCTACCATTATCTCTCCTCCTCCCCTTCACCACACTTCCATCATTCTCGACGACAACTCTTACCATGTCTCCAGAATAATGCTCCAAAATGAAAATTTCCAGCAGCAACAACATCATAAGCTTGGAGGAAGGTCTGCGTCTGGTTTGGAGGAACTCATCATGGGTTGCACTTCAACTGAAATCAAAGAGGAGTCATCCATCACAAACCCACAAGAAGCTGAATGGTTGAAGTACTCTTCTTACTGGCCAGACCCTGACAACCCGGATCATCATGGGTAGAAGAGTGTGAACCCAAAAAACACAAAAAAAGTAAAGTAAAAAAAAAAAGAGAGAGAGCCGTAGAGAAAAAACAAAAACCAAGTAGACAGCATCATAGTCATCATCATCATTAATGCTTGAAGCCTCCCTCAAGTTTCCTTTCAAGAAAAGGGCAAGAAATAATATCCATAGTTTGCTTTCTTTTTTATTTATTCTTTTCCTATGGAGGCCTGCATGTTTATAAAACTTTGGTGACTCTCACTGGAACTATAACAGTGTGCAATGGGACAAGCTGGAAAGAAAGAACAAAGGGTATATATGTAGAAGAATGTAAATCAAAGAGAAAGAGAAAGAAAAGAAAAACCCAAGAAAGGCTGCCGGCACTTCTGACACATGGAGAGGGAGAACCAAAGACCCAAA 2113 0.4297 MSKISNLSSVSSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEPNNSSRRDSGSGSCSSKEIVTHRDEMSAVVGVPPITSFTHHPLDIHQIKPDHFSFIPFRKSFDEVGIGEASTTREVVQASGSCEEVHERHHEHHHHQHHQQHAHHQISNSAFHISRPSHPISTIISPPPLHHTSIILDDNSYHVSRIMLQNENFQQQQHHKLGGRSASGLEELIMGCTSTEIKEESSITNPQEAEWLKYSSYWPDPDNPDHHG 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01628 442 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
Pste9g01628 442 MobiDBLite consensus disorder prediction 215 249 - -
Pste9g01628 442 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Pste9g01628 442 MobiDBLite consensus disorder prediction 314 337 - -
Pste9g01628 442 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Pste9g01628 442 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Pste9g01628 442 MobiDBLite consensus disorder prediction 215 246 - -
Pste9g01628 442 FunFam NAC domain-containing protein 73 56 212 - -
Pste9g01628 442 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 10 336 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01628 Pste-Chr9 16683963 16689867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01628 11 439 NAC Transcription Factor Family AT5G56620 54.248 2.21e-140 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste9g01628 NAM 2.8e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00548 3 3391178 3395530 Pste9g01628 9 16683963 16689867 PCT