Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01618 ATGTCAAGCTTGCATTACATGTTCAGCATGTTAGCAGTTCTTGTTATTCTTTTGCAAAATCCCAGTAGAGTACATTGCCATACCAAGGGAATTAAACCAAGACGTTCTGCAGGTAAAGGGTTATCGACTAACATGACTAGAGTGCAGTATTCCGAAGAGCAATTCATGAAATGGGTGAATTTTGTTGGTTCCCTCAAACACTCAGTTTTTAAGGCAGCTAAAAATAAGCTTGTGGCTTCTTACACTTTGCACGTTGATAAGGATCCTGCTGCTGGGGATTTTACCTCAATTCAAGAAGCCATCGATTCCCTTCCATTCATCAATCTTGTGAGAGTGGTCATAAAAGTCCATGCAGGTGTTTACACGGAGAAAGTTAACATTCCTGCTTTGAAATCCTACATAACAATAGAAGGAGCTGGTGCGGATAAAACCATTGTTAAATGGGGTGACACTGCTCAAACACCTGGCCCAAATGGGAGGCCACTAGGAACCTATGGTTCAGCAACTTTTGCTGTGAATTCACCTTATTTCATTGCCAAGAACATCACATTCCAAAACACAACTCCTGTTCCTGCATCAGGAGCAGTTGGAAAGCAAGCGGTGGCATTAAGGATTTCAGCAGACACAGCAGCATTTGTAGGCTGCAAATTCTTAGGAGCACAAGATACACTTTATGATCATGTGGGCAGACATTACTATAAGGATTGTTACATTGAAGGCTCTGTTGATTTCATATTTGGCAACTCTCTCTCCCTGTTTGAGGTTAGATTTTTCTGTTCTTAA 783 0.4125 MSSLHYMFSMLAVLVILLQNPSRVHCHTKGIKPRRSAGKGLSTNMTRVQYSEEQFMKWVNFVGSLKHSVFKAAKNKLVASYTLHVDKDPAAGDFTSIQEAIDSLPFINLVRVVIKVHAGVYTEKVNIPALKSYITIEGAGADKTIVKWGDTAQTPGPNGRPLGTYGSATFAVNSPYFIAKNITFQNTTPVPASGAVGKQAVALRISADTAAFVGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNSLSLFEVRFFCS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01618 260 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 72 254 - -
Pste9g01618 260 Pfam Pectinesterase 90 253 IPR000070 GO:0030599|GO:0042545
Pste9g01618 260 Gene3D - 31 256 IPR012334 -
Pste9g01618 260 SUPERFAMILY Pectin lyase-like 78 254 IPR011050 -
Pste9g01618 260 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01618 Pste-Chr9 16576121 16577533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01618 2 254 Carbohydrate Esterase AT5G47500 41.897 9.09e-57 184