Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01617 ATGTTGGAGGACACGGGGTTCTCATTTGTGAACTGTAAGGTCACGGGATCAGGGGCACTATACCTTGGAAGGGCTTGGGGACCCTTTTCTCGCGTGGTCTTTGCTTACACATATATGGACAACATCATCATTCCCAAAGGCTGGTATAACTGGGGTGATCCTAACCGTGAAATGACTGTATTCTATGGGCAATACAAATGCACAGGACCTGGAGCAAGCTTTGCAGGGAGAGTATCATGGTCACGAGAACTCACTGACGAGGAAGCTACCCCTTTTCTTTCACTTAGCTTTATTGATGGGACTGAATGGATCAAATTTTAGTTTAACTCATACACAG 337 0.457 MLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVSWSRELTDEEATPFLSLSFIDGTEWIKF 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01617 106 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 105 - -
Pste9g01617 106 SUPERFAMILY Pectin lyase-like 3 105 IPR011050 -
Pste9g01617 106 Gene3D - 2 106 IPR012334 -
Pste9g01617 106 Pfam Pectinesterase 3 100 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01617 Pste-Chr9 16573541 16575886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01617 3 106 Carbohydrate Esterase AT1G05310 48.077 6.01e-36 124