Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01612 CTGCATAGACTTGGTGTTCTTCCTCCTCCTTTGGAAATTGCAAACACAAACACTGACATGAGAATACCGTTTATAATGATCTTCTTACTCCTGAGCCATGTACACTCGCTGTATGATGAAGAACATGCAGTCCTTTTGAAGATAAAGGTGTTCCTACAAAACCCTTCATTCCTGAGTCACTGGACCACATCAAACACCTCTCACTGCTCTTGGACAGAGATCAGATGCAACGATGACTCTGTAACTGGGTTGACTCTAGTCAACAGAAGCATAAATCAAACACTACCACCTTTCATGTGTGACCTCAAAAATGTCACACTTGTTAATTTCAGCAGGAATTCAATTCCGGGGGAGTTCCCAACATTTCTCTATAAATGTTCCAAGCTGGCGTACCTCGACCTTGAACAGAATGACTTTTCTGGTAGCATTCCTGATGACATAGATAAGTTGGTTAACTTGCAATATCTTAACCTCGGTTCCACCAGCTTCAGCGGTGACATTCCTGCAAGCATAGGAAAGTTAAAGGAACTCAAAGTGCTTCAACTTCATTATTGTCCATTCAATGGTACTTTCCCTGCTGAGAGTATTGCCAACTTGCTCAATCTTGAATTCTTGGATATGTCCTCCAGCTTAGAGCTTCCTCCTTCCAAGTTCCCATCAAGCCTGACCCGGTTGAAAAAACTCAAATTCTTTCACATGTACAACTCCAACCTGTATGGGGAAATCCCTGAGACCATTGGAGAAATGGTGGCGTTGGAGGACTTGGATATATCATCAAGTAGCAATTTAACTGGACAAATTCCTAGAGGTTTGTTCATGCTCAAGAATTTGACCAAACTGTACCTTTTCAATAACAGTCTTTCTGGGGAGATACCTAGTGTGGTTGAATCATTGAATTTGATCGAACTCGATCTTGCGGAGAACAATCTCATAGGGAAAATACCTCATGATTTTGGGAAGCTCCAAAAGTTAACATGGTTGAGTTTATCTCTCAATCAATTGTCAGGGGAGATACCACAAAGCATAGGCCGTATTCCATCTCTGATACATTTTCGTGTTATGTTCAATAACTTGTCAGGTATTCTTCCTCCTGATTTTGGTCGCTACTCTAAGCTTGAAACATTTTTGGTTGCAAAAAATAAATTTAGTGAAAGGCTCCCAGATAACTTATGCTATCATGGTCAGTTACGTAATCTATCTGTCTATGAAAATTATCTTAGTGGAGAGTTGCCACATTCACTTGGCAATTGCCATAGCCTGACAGATCTGAAAATTTATAGTAATGAGTTTTTTGGTAGCATTCCTAGAGCTCTTTGGACTTTTAGTTTGTCAACTTTCATGGTGAGCAATAATAAGTTCACCGGTGAGCTTCCTGAAAGATTCTCCTCGAGCATTTCACGCTTAGAGATTAGTCACAATCTGTTTTATGGTAGGATTCCAACAGGGGTATCTTCATGGACTAATGTGGTAGTGTTTAAAGCCAGTGAGAACAATCTTAATGGGAGTATTCCAAAAGAGTTAACAGCTCTTCCTAATCTAACAACTCTATTGCTTGATCATAACCAGCTCACAGGGCCACTTCCATCAGATATAATATCATGGAAGTCCCTAAATAATCTAAATTTGAGCCATAACCAACTCTCTGGAAAAATCCCAGAGGCGATTAGTCGGTTACCTGTTCTCACTCAGCTTGACCTGTCAGAAAACCAATTCTCAGGTCCAGTTCCTTCTATACTTCCCAGATTCACCAATCTCAATCTATCCTCTAACCATTTGACAGGAAAAGTTCCAAGTGAATTTGAAAATTCTGTGTATTCCGACAGCTTTTTGAACAATTCTGGTCTCTGTGCTGATACCCCAGCACTGAACCTTAGGTTGTGCAATGTTGGCTTTGAAAGGCCAACCAAAAGTTCTTCTTGGTCTCTATCTTTGATTATGTGCCTGGTGGCAGTAGCCTTGTTGCTGGCTTTTTCGATATTATTCTTGATTATCAAACTTCACAGAAGAGGGAAACAAGGATTGGATAACTCATGGAAGCTCATTTCATTTCAAAGGCTAAGTTTCACTGAATCAAACATAGTGTCATCAATGACAGAACATAATGTTATTGGAAGTGGGGGATTTGGTACAGTATACCGTGTCCCGGTTGATGATTTAGGCTTTGTTGCCGTGAAAAAGATCTCCAGTGACAGAAAGTTAGACCAAAAGCTAGAGAGCTCATTTCGTGCAGAAGTTAAAATATTGAGCAACATTCGTCATAAAAACATTGTGAAGTTGTTGTGCTGCCTCTCTAATGAGGACTCCATGCTCCTTGTTTATGAGTATTTGGAAAACCGTAGCCTAGATAAGTGGTTACACGATAAGAGCAAGTCATCAACTGTGTCAGGTTCAGCCCATCATTTTGTGCTTGATTGGCCAAAGAGATTGCAAATAGCCATCGGGGTTGCTCATGGCTTGTGCTACATGCACCATGATTGCTCGCCACCCATTGTTCATCGAGATGTAAAAACAAGCAACATCCTTTTGGATGCTCAATTCAATGCAAAAGTTGCTGATTTTGGCCTGGCTAGGTTGTTAATGAAGCCAGGGGAACTTGCTACCATGTCATCTGTTATTGGCTCTTTTGGCTATATGGCTCCAGAATATGTTCAAACAAAGCGAGTCAGTGAGAAGATTGATGTCTTCAGTTTTGGGGTTATACTATTGGAGCTGACCACAGGTAAAGAAGCTAATTATGGTGATGAGCACTCATCTCTAGCAGAGTGGGCTTGGCGCCACATTATTGTAGGAAGCAACATAGAAGAGCTGCTAGACAATGATTTTATGGACCCAAGTTACACGAAACAAATGAGCAGTGTTTTCAAACTTGGGGTCTTGTGTACTTCAACACTTCCTGCTAGCAGGCCTTCCATGAAGGAGGTGCTACATATATTGCTTAGCTGTGGTGAAGGGTTTGTGTTTGGAGAGGGGAATATTAGCCAACATGATGGTGTTCCCCTTCTTAAGAATTCAAAATGGGATAGTAGGTTGGATGTTGTTGATAATGATAGTGATTAAGGATAGTCCTCATCAAAATAGAACAAACCAAACATGGTTTGTGTTAAGAGTCATTGGAATGAAAAGGTTTTAGTTGTATATGGACTTAACTCAAGC 3153 0.4063 LHRLGVLPPPLEIANTNTDMRIPFIMIFLLLSHVHSLYDEEHAVLLKIKVFLQNPSFLSHWTTSNTSHCSWTEIRCNDDSVTGLTLVNRSINQTLPPFMCDLKNVTLVNFSRNSIPGEFPTFLYKCSKLAYLDLEQNDFSGSIPDDIDKLVNLQYLNLGSTSFSGDIPASIGKLKELKVLQLHYCPFNGTFPAESIANLLNLEFLDMSSSLELPPSKFPSSLTRLKKLKFFHMYNSNLYGEIPETIGEMVALEDLDISSSSNLTGQIPRGLFMLKNLTKLYLFNNSLSGEIPSVVESLNLIELDLAENNLIGKIPHDFGKLQKLTWLSLSLNQLSGEIPQSIGRIPSLIHFRVMFNNLSGILPPDFGRYSKLETFLVAKNKFSERLPDNLCYHGQLRNLSVYENYLSGELPHSLGNCHSLTDLKIYSNEFFGSIPRALWTFSLSTFMVSNNKFTGELPERFSSSISRLEISHNLFYGRIPTGVSSWTNVVVFKASENNLNGSIPKELTALPNLTTLLLDHNQLTGPLPSDIISWKSLNNLNLSHNQLSGKIPEAISRLPVLTQLDLSENQFSGPVPSILPRFTNLNLSSNHLTGKVPSEFENSVYSDSFLNNSGLCADTPALNLRLCNVGFERPTKSSSWSLSLIMCLVAVALLLAFSILFLIIKLHRRGKQGLDNSWKLISFQRLSFTESNIVSSMTEHNVIGSGGFGTVYRVPVDDLGFVAVKKISSDRKLDQKLESSFRAEVKILSNIRHKNIVKLLCCLSNEDSMLLVYEYLENRSLDKWLHDKSKSSTVSGSAHHFVLDWPKRLQIAIGVAHGLCYMHHDCSPPIVHRDVKTSNILLDAQFNAKVADFGLARLLMKPGELATMSSVIGSFGYMAPEYVQTKRVSEKIDVFSFGVILLELTTGKEANYGDEHSSLAEWAWRHIIVGSNIEELLDNDFMDPSYTKQMSSVFKLGVLCTSTLPASRPSMKEVLHILLSCGEGFVFGEGNISQHDGVPLLKNSKWDSRLDVVDNDSD 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01612 1018 FunFam Kinase family with leucine-rich repeat domain-containing protein 776 994 - -
Pste9g01612 1018 FunFam Kinase family with leucine-rich repeat domain-containing protein 679 775 - -
Pste9g01612 1018 Gene3D Transferase(Phosphotransferase) domain 1 776 984 - -
Pste9g01612 1018 ProSitePatterns Protein kinases ATP-binding region signature. 703 726 IPR017441 GO:0005524
Pste9g01612 1018 Gene3D Phosphorylase Kinase; domain 1 671 775 - -
Pste9g01612 1018 SMART LRR_typ_2 274 298 IPR003591 -
Pste9g01612 1018 SMART LRR_typ_2 321 345 IPR003591 -
Pste9g01612 1018 SMART LRR_typ_2 558 586 IPR003591 -
Pste9g01612 1018 SMART LRR_typ_2 150 174 IPR003591 -
Pste9g01612 1018 SMART LRR_typ_2 510 534 IPR003591 -
Pste9g01612 1018 Gene3D Ribonuclease Inhibitor 38 194 IPR032675 -
Pste9g01612 1018 FunFam Receptor-like protein kinase HSL1 isoform A 38 189 - -
Pste9g01612 1018 SUPERFAMILY L domain-like 52 383 - -
Pste9g01612 1018 ProSiteProfiles Protein kinase domain profile. 697 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01612 1018 SUPERFAMILY RNI-like 298 599 - -
Pste9g01612 1018 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 259 978 - -
Pste9g01612 1018 Pfam Protein kinase domain 699 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01612 1018 Gene3D Ribonuclease Inhibitor 195 344 IPR032675 -
Pste9g01612 1018 Gene3D Ribonuclease Inhibitor 356 625 IPR032675 -
Pste9g01612 1018 Pfam Leucine rich repeat N-terminal domain 40 77 IPR013210 -
Pste9g01612 1018 FunFam Receptor-like protein kinase HSL1 isoform A 304 627 - -
Pste9g01612 1018 SUPERFAMILY Protein kinase-like (PK-like) 691 978 IPR011009 -
Pste9g01612 1018 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 195 296 - -
Pste9g01612 1018 Pfam Leucine Rich Repeat 299 321 IPR001611 GO:0005515
Pste9g01612 1018 SMART serkin_6 697 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01612 1018 Pfam Leucine rich repeat 534 571 IPR001611 GO:0005515
Pste9g01612 1018 ProSiteProfiles Leucine-rich repeat profile. 536 559 IPR001611 GO:0005515
Pste9g01612 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01612 Pste-Chr9 16487631 16490909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01612 41 982 Receptor kinase-like Gene Family AT5G25930 50.053 0.0 906
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste9g01612 Pkinase 2.1e-51 CL0016