Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01606 GTGCTTCTAATTGTAATTGAATATGCCACTCACTCTTTTCGAGTCTTGACATACAGTGTTCACACTACACTTAAATAAGCAAAGAAGGCTTTGGAAATTAACAAAAATCATCTTCCCACAACGCACAATTTCACCTCTCTCTCTCTCTCTCTCCCTTCTTTAATTTGTTTCCTCACATTTGACAACCTAGCTTCATTCACACAGCTGAAGGTATCTATTGCAAAATGAGTTCTCCAAAAAAGGATGAGAGTGAGACACAAAAGGTAGACATGATGGGAAGAAGAAGAAAAGGGAGAGCTTCCATAGGCATCATTTTAAGATATGCTGATTGTATTGATGTCTTGCTCATGTTAATGGGTGCTTTGGGAGCAATAGGAGATGGCATGTCCACAAATGTTTTGTTGCTGTTTGCCAGCCGTATCATGAACAGCTTAGGTTACAGTGACAACCTACAAAGTAGTCAGACTTACATGCCTGAGGTTGAAAAGTGCTGCTTATATTTTGTCTACTTGGGATTAGCAGCAATGGTGGTCGCCTTCATGGAAGGGTATTGCTGGAGCAAAACAAGTGAGAGGCAGGTGCTGAGAATTCGCTACAAGTACCTAGAAGCTGTCCTAAGACAAGAAGTAGGGTTTTTCGATTCGCAAGAAGCAACCACTTCTGAAATCATTAATAGCATATCAAAGGACACTTCGCTCATCCAAGAAGTTCTAAGTGAAAAGGTGCCGCTATTTTTTATGCACTCATCATCATTCGTCTCTGGGGTGGCGTTTGCCACGTATTTCTCTTTGAGGTTGGCTTTGGTAGCATTTCCAACACTGCTTTTGCTCATTATCCCTGGCATGATTTATGGAAAGTACCTTATCTATTTGTCAAAATCATCAGTAAAAGAATATGGAAAAGCAAACAGCATTGTAGAACAGGCACTTAGCTCCATCAAAACAGTTTACTCATTCACCGCGGAAAAGAGAATAATGGGGAGATATTCAGACATATTGTGTAGAACTACAAGGCTTGGAATAAACCAAGGCATAGCAAAGGGTCCGACAGTAGGGAGCACAGGTCTCTCTTTTGCAATATGGGCTTTTATTGCTTGGTATGGAAGCCATTTGGTTATCTACAAAGGTGAAAGCGGTGGAAGGATTTATGCATCTGGCATTTCCTTCATAATGTGTGGACTATCGCTTGGAGTGGTAGTTCCTGATTTGAAGTACTTTACGGAAGCATGTGTTGGAGCTTCACGAATATTTGACATGATTGACCGAATACCATTAATTGATGGAGAAGACAGAAAAGGAATTGTGTTAGAGCGCATTAGTGGCAATCTAGAGTTTGAGAATGTGAAATTCACATACCCTTCTCGTCCAGATATGGCTGTGCTTAGTGATTTCAATCTCCAAGTGGAGGCAGGGAAAACGGTTGCTCTAGTTGGTGCCAGTGGAAGTGGTAAGTCCACTGCAATAGCATTGGTGCAAAGATTTTATGATGCTGATGAAGGGGTTGTCAGGGTTGATGGTGTAGACATCAAAAGCCTACACTTGAAATGGATAAGAGGCAAAATGGGGCTTGTCAGTCAAGAACATGCTTTGTTCGGGACTTCCATAAAAGACAACATTATGTTTGGGAACCCTGATGCTACCATGGATGAAATAGTTGCTGCTGCCTCTGCAGCCAATGCTCACAACTTCATAAGGCAGCTTCCTCAAGGTTATCAAACCAAGAGAATAGCCATTGCAAGAGCCATCATAAAGAATCCTGTAATTCTCCTACTTGATGAGGCAACTAGTGCTCTCGATTCTGAATCAGAATTATTGGTTCAGAGTGCCCTCGACCAAGCCTCTATGGGGAGGACTACGTTGGTTGTTGCCCACAAGCTATCAACTATTAGAAATGCAGACATCATAGCAGTTGTTAGTAGTGGTCACATCATAGAAACTGGCACACACAATGAACTCATCAACAGGCCAAACGGCCACTATGCAAAACTGGCAAAATTACAGACACAATTGAGCATGGATGACCAAGATCAAAATCCAGAACTAGGTGCTCTTTCTGCATCAAGAAGCAGTGCAGGTAGACCAAGTACAGCCAGGTCAAGCCCTGCCATATTTCCAAAGTCACCATTGCTTGATAAAGTCACCCCGTCTCTAGTTTCTCAGCCTCCACCTTCTTTCACAAGGCTTCTTTCACTGAATGCACCTGAATGGAAACAAGGTTTAATTGGAACCCTCTCAGCTATAGCCCATGGCTCAGTTCAACCCCTATATGCATTAACAATTGGCGGTATGATTTCTGCTTTTTTCGCTGAAAGCCATCAAGAAATGAGGCACAGAATCAGGATTTATTCTTTGATTTTCTGTTCCCTTTCCCTTGCTTCTATTATCCTCAATCTCTTGCAACACTACAATTTTGCTTATATGGGAGCCAAGTTAACCAAAAGGATAAGACTACGCATGCTGGAGAATATCTTAACCTTTGAAACTGCTTGGTTTGATGAGGAACAAAACTCCAGTGGAGCATTATGCTCAAGGTTAAGCAATGAGGCTTCCATGGTTAAGTCCCTTGTAGCAGACAGACTCTCCTTATTAGTTCAAACTACTTCTGCTGTCACCATTGCAATGATCATAGGGCTTGCCGTGGCATGGAAGCTTGCTCTTGTAATGATAGCAGTGCAGCCACTCACAATCCTGTGCTTCTATACAAGAAAAGTGTTGCTATCCACACTCTCAAGCAAATTTGTTAAGGCACAAAATCAAAGTACACAAATTGCAGTGGAGGCAGTATATAATCACAGAATTGTGACTTCATATGGGAGCATTACAAAAGTCTTAAGGCTATTTGAGGAGGCTCAAGAGGCGCCAAGGAAGGAGGCAAGGAAGAAGTCTTGGCTAGCTGGCATAGGAATGGGTTCTGCTCAGTGCCTAACGTTCATGTCATGGGCTTTGGATTTCTGGTATGGTGGTACTTTGGTGGAAAAGAGAGAAATATCATCTGGGGATGTGTTCAAAACATTTTTTGTGTTAGTGAGCACTGGAAAGGTCATAGCTGAAGCTGGAAGCATGACTTCTGACCTTGCCAAAAGCTCTACTGCAGTAGCATCTGTGTTTGAAATTCTTGACCGGAAATCACTAATTCCCAAGGCCGGAGATGACACTAATGCAATGAAGTTGGAAAAGATGAGTGGAAAGATAGAGTTGAAGAATGTTGATTTTGCTTATCCAAGCAGGGCAGGGACCCCAATTTTGCGCAAGTTTTGCTTGGAGGTGAAGCCAGGAAAAAGTGTTGGGTTGGTTGGAAGAAGTGGATGTGGAAAATCAACAGTAATTGCCTTGATTCAAAGATTCTATGATGTTGAGAGAGGTTCAGTTAAAGTGGATAATGTGGACATAAGGGAATTAGACATTCAGTGGTACAGGCAGCATACAGCACTAGTGAGCCAAGAACCTGTGATATACTCAGGCAGCATACGCGATAACATTCTGTTTGGGAAGCAAGATGCAACAGAGAATGAAGTACTCGAGGCTGCAAGAGTTGCCAATGCTCATGAATTCATATCATCAATGAAAAATGGATATGAAACTGATTGTGGAGAAAGGGGGGTGCAGTTATCAGGAGGGCAAAAGCAGAGAATAGCAATTGCAAGGGCCATAATTCGCAACCCAAAGATACTACTTCTAGATGAGGCAACAAGTGCCCTGGATGTGCAATCAGAACAAGTTGTGCAAGAAGCACTTGATAGGACTATGGTAGGCAGAACCACCATTGTTGTGGCACATAGGCTTAACACCATCAAAGAGCTTGATTCAATTGTTTATGTGTCTGAGGGCAAGGTATTGGAGCAAGGAACCTATGCACAACTTAAGCACAATAGAGGTGCCTTCTTCAACCTTGCAAGCAATCAAATCCAAACTTAGGTATGTTAATTATATTATTTTCATGTACAAATTTGAGTTCATTGAGAAATAATGTAGCATTGTCAGTCTGGATGGCCATTGCTTAGGCCCATCTAAGGTTAATGGGTTGGAGGCCTTCTATATCCACTTTTTTGGTCCTACTATATTCAGCTATGTTTATACATAAAAGTCATTACATTAAGGGCCCAGATTGTAAGTCCGTATGGTGTTCTACAAGTACTGTATAAGGGTCTGGATCAGAATCCAATATGAAATTTGCCATGTATGTAACCCTAAATCCTAAAGACAAATATAATCATATCC 4217 0.4181 MSSPKKDESETQKVDMMGRRRKGRASIGIILRYADCIDVLLMLMGALGAIGDGMSTNVLLLFASRIMNSLGYSDNLQSSQTYMPEVEKCCLYFVYLGLAAMVVAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFDSQEATTSEIINSISKDTSLIQEVLSEKVPLFFMHSSSFVSGVAFATYFSLRLALVAFPTLLLLIIPGMIYGKYLIYLSKSSVKEYGKANSIVEQALSSIKTVYSFTAEKRIMGRYSDILCRTTRLGINQGIAKGPTVGSTGLSFAIWAFIAWYGSHLVIYKGESGGRIYASGISFIMCGLSLGVVVPDLKYFTEACVGASRIFDMIDRIPLIDGEDRKGIVLERISGNLEFENVKFTYPSRPDMAVLSDFNLQVEAGKTVALVGASGSGKSTAIALVQRFYDADEGVVRVDGVDIKSLHLKWIRGKMGLVSQEHALFGTSIKDNIMFGNPDATMDEIVAAASAANAHNFIRQLPQGYQTKRIAIARAIIKNPVILLLDEATSALDSESELLVQSALDQASMGRTTLVVAHKLSTIRNADIIAVVSSGHIIETGTHNELINRPNGHYAKLAKLQTQLSMDDQDQNPELGALSASRSSAGRPSTARSSPAIFPKSPLLDKVTPSLVSQPPPSFTRLLSLNAPEWKQGLIGTLSAIAHGSVQPLYALTIGGMISAFFAESHQEMRHRIRIYSLIFCSLSLASIILNLLQHYNFAYMGAKLTKRIRLRMLENILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVADRLSLLVQTTSAVTIAMIIGLAVAWKLALVMIAVQPLTILCFYTRKVLLSTLSSKFVKAQNQSTQIAVEAVYNHRIVTSYGSITKVLRLFEEAQEAPRKEARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVEKREISSGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVASVFEILDRKSLIPKAGDDTNAMKLEKMSGKIELKNVDFAYPSRAGTPILRKFCLEVKPGKSVGLVGRSGCGKSTVIALIQRFYDVERGSVKVDNVDIRELDIQWYRQHTALVSQEPVIYSGSIRDNILFGKQDATENEVLEAARVANAHEFISSMKNGYETDCGERGVQLSGGQKQRIAIARAIIRNPKILLLDEATSALDVQSEQVVQEALDRTMVGRTTIVVAHRLNTIKELDSIVYVSEGKVLEQGTYAQLKHNRGAFFNLASNQIQT 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01606 1229 FunFam ABC multidrug transporter SitT 979 1227 - -
Pste9g01606 1229 CDD ABC_6TM_Pgp_ABCB1_D1_like 42 341 - -
Pste9g01606 1229 Gene3D ABC transporter type 1, transmembrane domain 30 903 IPR036640 GO:0005524|GO:0016020
Pste9g01606 1229 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 665 952 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01606 1229 FunFam Putative ABC transporter B family member 8 634 974 - -
Pste9g01606 1229 Pfam ABC transporter 1010 1156 IPR003439 GO:0005524
Pste9g01606 1229 Pfam ABC transporter 386 521 IPR003439 GO:0005524
Pste9g01606 1229 Pfam ABC transporter transmembrane region 44 315 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01606 1229 Pfam ABC transporter transmembrane region 665 935 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01606 1229 Gene3D - 979 1229 IPR027417 -
Pste9g01606 1229 Gene3D - 358 593 IPR027417 -
Pste9g01606 1229 CDD ABC_MTABC3_MDL1_MDL2 989 1226 - -
Pste9g01606 1229 SUPERFAMILY ABC transporter transmembrane region 652 966 IPR036640 GO:0005524|GO:0016020
Pste9g01606 1229 FunFam ABC transporter B family member 1 29 365 - -
Pste9g01606 1229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 989 1225 IPR003439 GO:0005524
Pste9g01606 1229 PANTHER ABC TRANSPORTER B FAMILY 5 677 IPR039421 -
Pste9g01606 1229 SUPERFAMILY ABC transporter transmembrane region 30 352 IPR036640 GO:0005524|GO:0016020
Pste9g01606 1229 FunFam Multidrug resistance protein 1A 358 593 - -
Pste9g01606 1229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 368 590 IPR003439 GO:0005524
Pste9g01606 1229 MobiDBLite consensus disorder prediction 599 627 - -
Pste9g01606 1229 MobiDBLite consensus disorder prediction 599 632 - -
Pste9g01606 1229 ProSitePatterns ABC transporters family signature. 1128 1142 IPR017871 GO:0005524|GO:0016887
Pste9g01606 1229 CDD ABC_6TM_Pgp_ABCB1_D2_like 654 970 - -
Pste9g01606 1229 SMART AAA_5 1016 1202 IPR003593 GO:0016887
Pste9g01606 1229 SMART AAA_5 395 573 IPR003593 GO:0016887
Pste9g01606 1229 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 43 333 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g01606 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 978 1226 IPR027417 -
Pste9g01606 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 592 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01606 Pste-Chr9 16412368 16421848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01606 47 592 Calmodulin-binding Proteins AT2G36910 33.625 5.51e-87 307