Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01591 ATGGCAGGGAAGGGAAAGAACGTGATTGAAGAAGTGGTTATTGCGAAGGAGGAGTTGCAGTTAGAGTTTGTGATGAATGTAGGGATAGTGAAGGACTGCGAGTTAAGCATGCCTTACAGGGCACAATTGAGTAGCGATAAATGGAACCTATTCTTGCGTGAGCTAGAGTTTGAAAGCATCCTTTTAGAGTTCTTGAAAGAAGATGAAGACATGAAAAGGGGAATCCCCGTGACCGTATATGATAAAGGTGGCCATGAGTTCGAGATGATGCTCAAGAAATTTCACAAAGGTGAAACTAGTTACTATGTGCTCAATCGTGGTTGGGCCACTTTTTGTGACCAACATCGTCTCAAAGAGAATGACATTGTCGCCTTGCGCACCTTTCGCCATGCAATAACCCAAAACTTGTCCTTTGTTATCACTTTCCTCAAAATGAAGTGA 441 0.4286 MAGKGKNVIEEVVIAKEELQLEFVMNVGIVKDCELSMPYRAQLSSDKWNLFLRELEFESILLEFLKEDEDMKRGIPVTVYDKGGHEFEMMLKKFHKGETSYYVLNRGWATFCDQHRLKENDIVALRTFRHAITQNLSFVITFLKMK 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01591 146 ProSiteProfiles B3 DNA-binding domain profile. 77 146 IPR003340 GO:0003677
Pste9g01591 146 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 62 141 IPR005508 GO:0003677
Pste9g01591 146 CDD B3_DNA 63 144 IPR003340 GO:0003677
Pste9g01591 146 Gene3D - 37 146 IPR015300 -
Pste9g01591 146 Pfam B3 DNA binding domain 60 128 IPR003340 GO:0003677
Pste9g01591 146 SUPERFAMILY DNA-binding pseudobarrel domain 66 143 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01591 Pste-Chr9 16152108 16152548 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01591 35 144 B3 DNA Binding Superfamily AT4G03170 31.897 7.92e-09 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste9g01591 B3 2.3e-10 CL0405