Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01589 ATGGGATGTATTACAATTCTTGTTCAACATTTATCACAATGGCAGGAAGAAAAGGATGGGGAGGTTCCTAGGATTTTGCAGCGCTACACAGCTGAAAAACTCTCATGCTTTGGAGAACTTGCTCTAATGTACAATAAACCCCTCCAGGCTTCTGTACGTGCTGTAACTAAAGGAACTCTTTGGGCTTTGAAACGAGAAGACTTTCGAGGGATTTTAATGTCAGAATTTTCTAACTTATCATCGTTGAAGTTGCTTCGGTCTGTAGATCTCCTCTCAAGGTTGTCAATTTTACAACTCAGTCAGATTTCTGACTCCCTTTCTGAAGTTGCCTTCTCAAATGGGCAAACAATTATAGAAAAAAATGAAGTCCTTGCATTGTACATCATCCAGAAGGGACGAGTGAAAATCAATTTTGATTCTGATTTGTTGATGAGTTCAAATGCCTACAGCCTCAAGTCTGACATCCAAAATGAGGACGATGTACAGAGCAGAAGAGAACTGTCAATAGAGAAGCCTGAGGGAAGCTATTTTGGTGAATGGGCCCTTCTTGGTGAACATATAGGTTCCTTGAGTGCTGTTGCCGTGGGTGATGTTGTATGTGCTTTGCTAACAAAGGACAAATTTGAATCTGTTATTGGCTCCTTACAAAAGATTTCTCTGGAAGATCACAAGTCAAGGGATAATTCCAAGGAGTTGACTAGAAATTATGATTTTTCATCCTTTGATAAAGTCCACCTTTCAGATTTGGAGTGGAGAAAGACTCTATATTCCACTGACTGCTCTGAAATAGGTCTTGCAAATTTAAGAGATTCAGAAAATGTACTTACTTTGAAGAGATTTTCTAAGCCAAAGGTGAAAAGGCTAGGGAAGGAATCACAAGTTTTGAAAGAGAAAGATCTGATTAAGAGTATGGGCTCTTCAGCATGTATACCACAGGTTTTATGCACTTGTGCTGACCGCATGTATGCTGGAATACTGCTAAATACTCACCTTGCTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTTAGTGAATTAACAGCGCAGTTTTGTGCTGCTTCTGTTGTTACTGCCTTAGAAGACTTGCACAAGAATGGTGTTCTCTACAGAGGTGTGTCACCTGATGTTTTGATGTTGGAGCAAACTGGACATGTACAGCTGGTGGACTTCAGATTTGGAAAACAGCTTTCTGGTGAGAGAACATTCACAATTTGTGGAATGGCAGATTCACTGGCCCCAGAGATTGTTTTGGGAAAAGGTCATGGTTTCCCTGCTGACTGGTGGGCGTTGGGAGTTCTAATATATTTTATGCTGCGCGGTGAGATGCCATTTGGATCATGGAGAGAAAATGAACTTGATACTGTTGCCAAAATTGCGAAAAGGAAGCTACATCTTCCCGAGACTTTTAGCCCTGAAGCTGTTGATCTCATCTCCAAGCTACTTGAAGTGGAAGACAACACTAGACTTGGTAGCCAAGGTCCTGATTCTGTCAAGAGTCACCCATGGTTTAATGGTATTGAATGGGAAGGAATTAGACACCACACCTTTCCCGTTCCTCAGGAAATTATTTCTCGGATAACACAGTACTTGGAAATTCATTCTGAGGATTGTAGTACTGTCTATCTGGGATCCCCATTCCAGGAGGTAAAAGAACTTAATGTTCCTGAATGGCTTGAGGACTGGTAGAGGAAAGACCATTACGTTTTTGTCTTCTTTTTGAAGTTCGGCTCTGCAGCAATACCTTTGCTTATTTGGACAAATTGCAATCCAAGAATGCAGTTAACCAGAAAATGCAAAGAGAGCAATAGGTGCAGAATATTCCCTTTAGTTTGAATCTTTTAGTTGCAGAGTGGGTAGGGTAGGTTTATTATTTTCTTCATCTCTTCCCTTTCTAATTTTTTTGGGGTAATTCCCTCCTTTGTAAATATTATATATGTGTAAATGGTTGAATTTGTTTCATCTTCAATTGCAATTCAAGCAATTTAATTTTGTCATGAACCAATATTCATTTTAACACACAAAATGTAATCTTATTGTTGTCCTCCTGGTACTTTTTGTTGTGTCTAATTCGATTTTAC 2078 0.3961 MGCITILVQHLSQWQEEKDGEVPRILQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVAFSNGQTIIEKNEVLALYIIQKGRVKINFDSDLLMSSNAYSLKSDIQNEDDVQSRRELSIEKPEGSYFGEWALLGEHIGSLSAVAVGDVVCALLTKDKFESVIGSLQKISLEDHKSRDNSKELTRNYDFSSFDKVHLSDLEWRKTLYSTDCSEIGLANLRDSENVLTLKRFSKPKVKRLGKESQVLKEKDLIKSMGSSACIPQVLCTCADRMYAGILLNTHLACPLSSILSSPFSELTAQFCAASVVTALEDLHKNGVLYRGVSPDVLMLEQTGHVQLVDFRFGKQLSGERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLHLPETFSPEAVDLISKLLEVEDNTRLGSQGPDSVKSHPWFNGIEWEGIRHHTFPVPQEIISRITQYLEIHSEDCSTVYLGSPFQEVKELNVPEWLEDW 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01589 561 SMART serkin_6 257 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01589 561 Gene3D Transferase(Phosphotransferase) domain 1 334 519 - -
Pste9g01589 561 Pfam Cyclic nucleotide-binding domain 17 74 IPR000595 -
Pste9g01589 561 Pfam Cyclic nucleotide-binding domain 109 212 IPR000595 -
Pste9g01589 561 Pfam Protein kinase domain 267 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01589 561 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 80 228 - -
Pste9g01589 561 SUPERFAMILY cAMP-binding domain-like 30 74 IPR018490 -
Pste9g01589 561 Gene3D Phosphorylase Kinase; domain 1 247 333 - -
Pste9g01589 561 ProSiteProfiles cAMP/cGMP binding motif profile. 90 213 IPR000595 -
Pste9g01589 561 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 26 520 - -
Pste9g01589 561 SUPERFAMILY cAMP-binding domain-like 82 215 IPR018490 -
Pste9g01589 561 Gene3D Jelly Rolls 2 78 IPR014710 -
Pste9g01589 561 CDD CAP_ED 90 213 IPR000595 -
Pste9g01589 561 ProSiteProfiles Protein kinase domain profile. 230 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01589 561 Gene3D Jelly Rolls 79 232 IPR014710 -
Pste9g01589 561 SMART cnmp_10 90 227 IPR000595 -
Pste9g01589 561 CDD CAP_ED 37 73 IPR000595 -
Pste9g01589 561 ProSiteProfiles cAMP/cGMP binding motif profile. 37 73 IPR000595 -
Pste9g01589 561 SUPERFAMILY Protein kinase-like (PK-like) 236 535 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01589 Pste-Chr9 16124683 16130015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01589 18 561 PP2C-type Phosphatase Gene Family AT2G20050 61.957 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Pste9g01589 Pkinase 1.9e-32 CL0016