Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01585 ATGGCTTCATCAATTCGTCCCTCGCTTTCTTCCATCATGTTACCCTCCCTCTCTTCTTGCAACCCTTCTCAAAAGTTCTCTCTTTTTTATCTCAGTAACGGTAAGCCTAAATCACCTCTCTCTGTCTTTCACCCTTTCGCGAATAGTCGTATTAGACAGTTTCATAATTTTGGCCTGAAAGCTTCCAGGTTTTTGCGACATGATGATAAGTGCACGAGACTGATGGCATCTGGGAACATGTTAACAACTGCTACACAGGAAAATGCGCTAGATTGGATCAAACAGGACAAGAGAAGAATGCTTCATGTTGTTTATCGTGTTGGGGACTTGGACAGAACCATAAAATTTTATAAAGAGTGTCTAGGAATGAAATTGCTCAGAAAGCGTGACATGCAAGAACAGAGATATACTAACATCTTTCTTGGATATGGGCCTGAAGATGCTCACTTTGTTGTTGAACTGACATACAATTATGGGATTGACAAATATGACATTGGAGATGGATTTGGCAATTTTGGTCTTGCTGTTGATGATATTTCAAGAATAGTGGAACTTGTTAGAGCTAAGGGTGGCAAAATTACGAGAGAGCCAGGTCCTGTCAAGGGAGGCTACTCAATAGTTGCATATATTGAAGATCCTGATGGTTATAAATTTGAACTTTTAGAAAGGGCTCCCTCTCCCGAGCCTTTGTGCAAAGTAATGCTTCGAGTGGGTGATCTTGATCGTTCCATTAAATTTTATGAGAAGGCTCTTGGTATGAAGCTACTTCGAACACAAGATGATCCAGAATCCAAGAGTACAATAGCAATACTGGGTTATGGTCCAGAGGAAAAAAATACTGTCCTGGAATTAACTTACAACTACGGAGTCACAAATTATGATAAAGGCGATGCTTATGCTCAGATTACAATAGGCACGGATGATGTGTACAAAACTGCAGAAGCAATTAAACTTGCTGGAGGGAAGATTATAAGCGAACCTGGACCAGTACCTGTTATAAGGACAAAGATCACATCTTGTGTGGATCCTGATGGTTGGAAAACTGTATGGTTTATGGACATTTTCAGCATTATTTCCCTTGTTTTTGTAGATAATGTTGACTTTCGTAGGGAGCTGGAGTGA 1122 0.402 MASSIRPSLSSIMLPSLSSCNPSQKFSLFYLSNGKPKSPLSVFHPFANSRIRQFHNFGLKASRFLRHDDKCTRLMASGNMLTTATQENALDWIKQDKRRMLHVVYRVGDLDRTIKFYKECLGMKLLRKRDMQEQRYTNIFLGYGPEDAHFVVELTYNYGIDKYDIGDGFGNFGLAVDDISRIVELVRAKGGKITREPGPVKGGYSIVAYIEDPDGYKFELLERAPSPEPLCKVMLRVGDLDRSIKFYEKALGMKLLRTQDDPESKSTIAILGYGPEEKNTVLELTYNYGVTNYDKGDAYAQITIGTDDVYKTAEAIKLAGGKIISEPGPVPVIRTKITSCVDPDGWKTVWFMDIFSIISLVFVDNVDFRRELE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01585 373 ProSitePatterns Glyoxalase I signature 1. 102 123 IPR018146 GO:0004462|GO:0046872
Pste9g01585 373 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 99 223 IPR037523 -
Pste9g01585 373 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 99 225 IPR029068 -
Pste9g01585 373 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 231 347 IPR029068 -
Pste9g01585 373 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 229 353 IPR037523 -
Pste9g01585 373 Gene3D - 226 353 IPR029068 -
Pste9g01585 373 Gene3D - 72 225 IPR029068 -
Pste9g01585 373 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Pste9g01585 373 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 233 346 IPR004360 -
Pste9g01585 373 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 100 220 IPR004360 -
Pste9g01585 373 NCBIfam lactoylglutathione lyase 99 224 IPR004361 GO:0004462|GO:0046872
Pste9g01585 373 CDD GlxI_Ni 100 221 - -
Pste9g01585 373 PANTHER LACTOYLGLUTATHIONE LYASE 76 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01585 Pste-Chr9 16086588 16089875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01585 232 360 Calmodulin-binding Proteins AT1G08110 25.325 3.67e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01585 9 16086588 16089875 Pste9g01585 9 16086588 16089875 ECH
Pste3g00443 3 2553246 2556179 Pste9g01585 9 16086588 16089875 PCT