Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01573 CAACACTGTATAAGTTACTCCTAACACTGTGTACACACAAAAACCTCGGAGAAGCATCTCTTAAAAAAAATAAAAATGTAATTTTTTCAATTGTTTATAAATTCTGATTTTCAATCTCAGTTTCTGTTTCCCTCTGCCTCTCTTCTTGAGAATAAGTGATACTGTAGTTGTAGTGTGAGGTGAAGTTTGATGTCTGTGCCATTGGAGAAAGGGTATGTCAGGTTATCCGAGGTTCCTGCAATGGAAGGCTCAGACAAGTTTTGCGAGAGTACTAGTGGTGGCTTGAATTTCAAGGCTACTGAACTGAGGCTTGGCTTGCCAGGGTCTGAGTCACCACAGAGAGATGAGGGTGTGGAGGACAAGAAGGTGCACCCTTTAGGCATGGTGAAGAGTTTGGTGTCTGGGGCCAAGAGGGGTTTCTCAGACACCATTGATGGGGGTTCTGGGAAGTGGCTTCTCTCTGGGAATGGTGGATCTGAGGTGGCTTTGGGTAAAGATGTTGGCTTGTTCTCTCCAAGGGGTGTTGGCAGGACTGAGTGTACCAACCAACAAGCATCTGTTGTGAAAGATAAAGTTCCTCAATCTCCAAAGCCATTGAATGAGCAGAAGCCTCAGATATCTGCTCTTGCTGCAAAGGAACAGGTTGTGGGATGGCCACCAATCCGTTCTTTCAGGAAGAACTCAATGACCAATCAGCCACAAAAAAAAGATGATGATGCTGAAGCCAAGTCTGGATGCCTTTATGTGAAAGTTAGCATGGATGGTGCTCCATACTTGAGGAAAGTGGACCTCAAAACCTTTGACACTTACATGGAACTGTCTGCAGCACTGGAAAAGATGTTTACTTGTTTTACGATCAGTGAGTTTTGCTTTTCTTTACTAGCAAATTGGGATCAAGCTCAGGCTGGTTGGTTCCATGAGCTGAGGAATTTTTACAGGAGTCAATGTGGTTCCCACGGAGTTTGTGGTCGAGATAAGTTGAGTGAAAGTAGATTAATGGACCTCCTTCATGGTTCAGAATATGTGCTCACCTGTGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCATGGGAGATGTTCACTGACTCTTGCAAAAGGTTGAGGATAATGAAAAGTTCTGAAGCAATTGGACTAGGTGAGGCTGATACGTAAACAATTTTATACTACGTCAATTGCATTGAGAAACTCCATCATATAATCAAATCCTAAGGCACAATCATAACCTGATGCAACTCAGTTGCAATTCTCTATACGATGGTATCAACGTATAGCTATAAGAGCCAATAAATGTGTAAAGCCACTGAATAGCAAACAAATTTGCACAAATTAGAAGATAAATCTAATGGAATGAAAATGGAGAGTTTTATAAGTAAAGTATTGGACTATTTATGGATTTGATGGATTCTAGCTGCAAATCTTTCTTCCAATATGAGCACGCTTTCTTGAACTCCATTATTTCATCTTTTTACATATATTCTAAATTATAATTCTTTTAAACGTTTTAATTCTTTTAATACTGATGAGAGTTCATATTATTATCTGCTCTACTCTGAAA 1564 0.4035 MSVPLEKGYVRLSEVPAMEGSDKFCESTSGGLNFKATELRLGLPGSESPQRDEGVEDKKVHPLGMVKSLVSGAKRGFSDTIDGGSGKWLLSGNGGSEVALGKDVGLFSPRGVGRTECTNQQASVVKDKVPQSPKPLNEQKPQISALAAKEQVVGWPPIRSFRKNSMTNQPQKKDDDAEAKSGCLYVKVSMDGAPYLRKVDLKTFDTYMELSAALEKMFTCFTISEFCFSLLANWDQAQAGWFHELRNFYRSQCGSHGVCGRDKLSESRLMDLLHGSEYVLTCEDKDGDWMLVGDVPWEMFTDSCKRLRIMKSSEAIGLGEADT 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01573 323 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 32 317 IPR003311 GO:0005634|GO:0006355
Pste9g01573 323 Pfam AUX/IAA family 37 319 IPR033389 -
Pste9g01573 323 Gene3D - 177 322 - -
Pste9g01573 323 ProSiteProfiles PB1 domain profile. 183 312 IPR000270 GO:0005515
Pste9g01573 323 SUPERFAMILY CAD & PB1 domains 181 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01573 Pste-Chr9 15943917 15946612 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pste9g01573 AUX_IAA 1.6e-80 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01573 9 15943917 15946612 Pste9g01573 9 15943917 15946612 ECH
Pste3g00423 3 2442790 2445974 Pste9g01573 9 15943917 15946612 PCT