Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01572 GGGAAAATAAAAAGCAAAGAGAGAAAAGAAATAATAGGAAAAGAAAAAGAAAAGCAATAAAGAAAGGGAAGAAAAGAGAGTAAACAAAGACAAAGGTTCTCAAAACTCCATAATTATTCAAATTCTTTCAAAACGGGGTCCAACTCCAAGCAGTGGTGTTGCCCCCTACTTAATCATCCCTATCAAATTTTCTACAAAGGGAGTGTTTGGGAGAGAGGGAAAGAGAAAGATCACAGAAAGAGAATTCATCTTTCTCTCCAAACACAAAAAAATCTAAAAGGGATAATTGAAGAAAGCATGAATAGAGGTGTTCTTCAGAGTTCACCGGTGCAACAAATGATGACCGGAAACCCTAACTGGTGGAACATGAATATCAATACCATGGCTCCTCAAGCTTCTCCTTTCTTCTCCACTCCTTCCAACTTCCCTATCCCTTATGCCCCCACTGCTCTTCCCTTTCCCTCTTGGCATGAGAATCCCGAGTCATGGAGCCAGCTACTCATGAACGGAGTTATCGATGAACATGAACATGAACAAGGAACGGGCCACTTTCAGACTAAGAAGCTGGACAACTGGGAGGATCAAATTCTACCTCAGCCTCCAAACGCTTCTCTTGTTGATGTTAAACAAGAAAACTCGGTTAACAGCTATGTATATGCTCATGGAAACGAAGAACTTCAGTCATCAAAGCCATCTTGGTCTCCAAAATCCTGTGTCACAAGTTTCAGTAGCAACATGTTAGATTTCTCTAACAATAAGACAGATGCCAGGCATCCACCACCAGATCGATCTTCTGAGTGCAACAGCAGTGCGGGTGGTGGGGCACTGAAGAAAGCTAGGGTTCAAGCCTCTGCTACAACACAGGCCACATTTAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACGGCTCTTCATCAGCTCGTTTCCCCATTTGGGAAGACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCTTACCTGAGCGGTGGATCAGGAAACCCGAGGCAGCAACAATCAGTTCAAGGAGAGAATTGTATGTTTCCTGAAGACCCCGGTCAGTTGCTGAATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGACGGAAGGTGAAGAAGAAGCAAAGAAGGGACTGAGGAGTAGAGGGTTGTGTCTGGTGCCAGTGTCATGCACACTGCAAGTTGGGAGTGACAATGGAGCAGACTATTGGGCTCCTGCCTTAGGAGGGGGCTTTCGTTAGATCAAGTCTATATATAATTTGGGCAGCTTATATATATAAATATGGTAGCATGCAAAGTGGTAAATTCATGGAAATGATATAACATCATGAGCAGTCAATCTGCTAAAACAACTAAGGCTGATTGCTCATGATGCTATACTTCATTCCTGAATAAAATGTGTGCTAGCTAGCCTTCACAATTATTTGCCAGCCCTTCAACATTTCATAATTCATGGAAGTCAACTTTAATTTTCTTTATTTTCACTAGCTTAATTAAGATTGTGCCACTAATGCGCTTTATTTCAATGTATATGCAATATTTGTATGATTAATCATTTTAATGCTACTTTTTTAGCAGCATTAATTCAACTCATGACCATTATGCTC 1653 0.4156 MNRGVLQSSPVQQMMTGNPNWWNMNINTMAPQASPFFSTPSNFPIPYAPTALPFPSWHENPESWSQLLMNGVIDEHEHEQGTGHFQTKKLDNWEDQILPQPPNASLVDVKQENSVNSYVYAHGNEELQSSKPSWSPKSCVTSFSSNMLDFSNNKTDARHPPPDRSSECNSSAGGGALKKARVQASATTQATFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSGGSGNPRQQQSVQGENCMFPEDPGQLLNENCLKRKAAGETEGEEEAKKGLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01572 329 Gene3D - 180 242 IPR036638 GO:0046983
Pste9g01572 329 CDD bHLH_AtbHLH_like 191 240 IPR045239 -
Pste9g01572 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Pste9g01572 329 MobiDBLite consensus disorder prediction 150 182 - -
Pste9g01572 329 FunFam transcription factor bHLH68 isoform X1 190 243 - -
Pste9g01572 329 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 74 311 - -
Pste9g01572 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 243 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01572 Pste-Chr9 15871085 15875414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01572 1 271 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.699 5.93e-66 209