Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01547 CACTTTTTTATTTTCTCTCTCTGTCTGTCACGGACAGAGAAAAACTCAGACACCCACGTTCACACTCCACACATACCATCCCTCACTGTTAGTTCTTCCTCTTCTCTTGCTCTTAATGGAATGATGGAACACAACATCATCGTCAATACCAATACCAACACCAACACCAACACCGTGATCGCCCCGTTTGTCATTAAAACATACAACATGGTCAATGATCCCACCACCCATAAACTCATCACGTGGGGCCCTGCCAACAACAGCTTCATCGTCCTCGACCCCCTCCACTTCTCCCACTCCCTCCTCCCTGCTTTCTTCAAGCACAATAACTTTTCCAGCTTCGTTCGTCAACTCAACACCTACGGTTTCAGAAAGGTGGATCCGGATCGATGGGAATTTGCGAACGAGTGGTTCCTGCGGGGGCAGAAGCACTTGTTGAGGAACATCGTGCGAAGGAAGCACGGTGGAGGAAGGAGCAATACTTCGCATTCGCATCCGTTGAAGTTGGAGGAGTTGGACGACGAGGCCATGGCGATGGAGATAGCCAAGTTGAAGGAGGAACAAAAAGCGTTAGAGGAAGAGCTTCAAGGAATGAACAAGAGGTTAGAGACAACCGAAAAACGACCACAACAAATGATGGCTTTTCTGGCTAAAGTTGTCGAGGACCCGCAGGTTCTGTCTCGGATTCTCCGAGAAAGAGAAAAGAAACACCTCGGTGAGAAAAAACGCCGTCTCATTCAGCCTCATTCGACGGCGGCGACATCCTCCTCCTCCTCCTCCGGCATTAAGACGGAGTTAGAAGAAGACGAAGGTAATAATAATATCATGTCATCGTCACCGGAGACAGGGTTGGAAATCGATCATAGTAATAATAATATTTGTTCGGCGGCGGGGTGTTGGGGGGAACACGGTTGTTATGGGTATAATTGCACCGCCATGACGGCGCCGGTAACGGTAGTTTCTCCGGTGACGGCGGCGGCGACGGGAGGAGGGTATTTGGGACGTGGGGGGTTTTGGGGAGAAATGGCGGCGGAGGGGAGTGCGCTGCCGCCTTATCCGTTTTCGCTATTGGAAGGTGGCTTT 1083 0.506 MMEHNIIVNTNTNTNTNTVIAPFVIKTYNMVNDPTTHKLITWGPANNSFIVLDPLHFSHSLLPAFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLRNIVRRKHGGGRSNTSHSHPLKLEELDDEAMAMEIAKLKEEQKALEEELQGMNKRLETTEKRPQQMMAFLAKVVEDPQVLSRILREREKKHLGEKKRRLIQPHSTAATSSSSSSGIKTELEEDEGNNNIMSSSPETGLEIDHSNNNICSAAGCWGEHGCYGYNCTAMTAPVTVVSPVTAAATGGGYLGRGGFWGEMAAEGSALPPYPFSLLEGGF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01547 321 MobiDBLite consensus disorder prediction 197 241 - -
Pste9g01547 321 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste9g01547 321 MobiDBLite consensus disorder prediction 208 222 - -
Pste9g01547 321 SUPERFAMILY "Winged helix" DNA-binding domain 20 112 IPR036390 -
Pste9g01547 321 Gene3D - 15 113 IPR036388 -
Pste9g01547 321 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste9g01547 321 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste9g01547 321 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste9g01547 321 FunFam Heat shock transcription factor 1 16 113 - -
Pste9g01547 321 Coils Coil 129 168 - -
Pste9g01547 321 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 19 233 IPR027725 -
Pste9g01547 321 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste9g01547 321 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01547 Pste-Chr9 15542308 15543896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01547 19 206 HSF AT3G24520 63.542 3.70e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pste9g01547 HSF_DNA-bind 8.8e-30 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01547 9 15542308 15543896 Pste9g01547 9 15542308 15543896 ECH