Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01546 CCCTGGGACACTTCTTTTTTTCAAAAACATTAACAGAAGCAGTGCAGGCGCACGCGCTCCTCCTCCCCTTCACGGTAGCGGCGTGACGACACGCGCGCCCTTCAACTCCGTTCCACTATCCTGACATACAGAAAAGAGTGCTTTTCCTATTCCTTTTCAAGTTTTAAACTCTTGTTTTTCTTTCGCAACACTTTGTTTCCCGAGAGAGGAAGCGTTCACCTCCGAGAAGATTCTCCGGCTTCTGACTCTATTTCTCCTCACCTGCGTGTGCATAGTGCATATTCTTGCTAGAACAAAACATTTCATTGCAAACTTTTGAAGTTGATGAGTGTGGTTGCGAGAGCAATGCCGCGATCCAATTCGGCTGTGCACCACCACCGTCAGACCTCCGATAACTTCATCCTCGACGCTCACGGAAGATGGTTGCACTCTTCGACTCTCGCGCAGGAGTTGGGGACTCGATCTTCGAGCTTGAGGAAAAACGACGGTGATCGCGTTTTAACAAGTGGCTTGTTTGATCTGCATTCCTTCGATACCGAGCTCTTACCTGAGATATATGGCGTTCACAATGACTCTTTAGTGAATCATACTGTTCGGGGACAAAGTTTTGCTGACCTCGAGTCAATTCTCTCTGGCAACAAACTTGTACAAAGGTCTCGTGGCTTGCCTGAGAGCCATCTCCTTAAAAGTGTCTCAACGGATAAAGAGAGAGCAAACAATGTTGCCAAGATCAAAGTTGTGGTTCGGAAGAGACCACTAAATAAGAAGGAAATAGCAAAGAGAGAGGAAGATGTTATATCCATAGATTCAAATTTTCTCACGGTGCATGAAAGAAAACTCAAGGTTGACTTAACAGAATATATTGAGAAACATGAGTTTGTTTTTGATGCTGTGCTGAATGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTGGAGCCAATTGTTCCACTGATTTTCCATCGAACAAAAGCAACTTGCTTTGCATATGGTCAAACTGGGAGTGGGAAGACATATACTATGCAACCTTTGCCTCTGAAAGCATCCTATGATATTTTGAGATTAATGCACCACACATACTGGAACCAAGGTTTCCAACTATATGTTAGTTTCTTCGAAATATATGGGGGGAAACTTTTTGATCTCCTCAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGCAAACAGCAGGTTTGCATTGTTGGCTTGCAAGAATATAGAGTATATAAAGTTGAGACAATCAAGGAATTTATTGAGAGAGGAAACGCCACAAGAAGTACTGGTACAACTGGAGCCAATGAGGAATCCTCTCGATCGCATGCTATACTTCAGCTTTGTATTAAGAGATCAACCGAAGGAACTGAATCAAAGCCTGCTCGACTTGTGGGCAAACTATCTTTTATAGATCTGGCTGGAAGTGAACGTGGTGCAGATACTACAGATAATGACAAACAGACTAGGATTGAGGGGGCTGAGATAAATAAAAGCTTACTTGCTCTGAAAGAATGCATTAGAGCTCTAGACAATGACCAAGGGCATATTCCTTTCAGAGGAAGTAAATTGACTGAAGTTTTGCGAGATTCTTTTGTTGGTGATTCACGCACTGTAATGATATCATGCATTTCACCTAGCTCAGGTTCGTGCGAGCATACTCTTAACACATTAAGATATGCTGACAGACAGTTGTATTTCAGAGTGAAGAGCCTGTCAAAAGGGAACAGCTCTAGAAGGGATCCCCTTTCTTCCTCAAACCTTAAGGACTCTACTGTGTTGTCTGGGTCTTCAGTTTTATCTCATGACGATACCTTGGAGGAAGAAATGACACATGTTTCCATTGACAGGAATCGGTTTGGTTGGTCGAAACAGTTGGAAAGAGAACCCTCTCCTCCTAATAATGTGGATCGTGTTCCAAGTGGTAGAATGGGGGAAAATTTGGCACCATTTTTGTTTTCTGATCCACAAAATGGTCAAAGAGGTAGTCAAAATGCCAGAACTGCAAATAAATATGATTACCTAGGACCAACATATGAACACGACAGAACAAGAAAAACAAGTAAGAGGGTGGATAACAGCCAATTATCTGCTTTGGAGGACAAGAAGAAGATAGAATCTTGTGTTAAACATGTGGATGCATCACATTTTGAGGCTAATCATTCTGATCCTGACAATAATTTGAATTCCCTCTTGAAGGAAGAAGAAGATCTGGTAACTGCTCACCGGAGACAGGTGGAGGAAACAATAGACATTGTTAGGGAGGAAATGAATTTACTCGTTGAAGCTGACCAACCAGGAAATCAACTGGATGATTATGTTTCTAAATTGAATACCATTTTATCGCAAAAGGCTGCAGGAATTTTTCAATTGCAGACACAGTTGGCTCAATTTCAGAGACGTTTAAATGAGTATAATGTTTTTGTATCTTCTGGTAATTGATGGTGCTAATGAGTGAACGATGGATGTGTTGTGGAAGGGGAATTCTTTGTGCTGTTTGGTATGGCTTCTAAGATTTCATTGCCGTGAATATTTTCTCAATATATTGTGGGTTTTTTAGTGCAGAAGAAAGGGAATCTAACCCTTCATTGTTCTACACATGATTGCTCAGTCGAGTCACTGTTGTGAAACTGAATAGAAACTACATATACAAATGTATGTCCACATGCTTATTTGACATACTATTATATATTTATATTACCTGTAG 2704 0.412 MSVVARAMPRSNSAVHHHRQTSDNFILDAHGRWLHSSTLAQELGTRSSSLRKNDGDRVLTSGLFDLHSFDTELLPEIYGVHNDSLVNHTVRGQSFADLESILSGNKLVQRSRGLPESHLLKSVSTDKERANNVAKIKVVVRKRPLNKKEIAKREEDVISIDSNFLTVHERKLKVDLTEYIEKHEFVFDAVLNEDVSNDEVYAETVEPIVPLIFHRTKATCFAYGQTGSGKTYTMQPLPLKASYDILRLMHHTYWNQGFQLYVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVYKVETIKEFIERGNATRSTGTTGANEESSRSHAILQLCIKRSTEGTESKPARLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRQLYFRVKSLSKGNSSRRDPLSSSNLKDSTVLSGSSVLSHDDTLEEEMTHVSIDRNRFGWSKQLEREPSPPNNVDRVPSGRMGENLAPFLFSDPQNGQRGSQNARTANKYDYLGPTYEHDRTRKTSKRVDNSQLSALEDKKKIESCVKHVDASHFEANHSDPDNNLNSLLKEEEDLVTAHRRQVEETIDIVREEMNLLVEADQPGNQLDDYVSKLNTILSQKAAGIFQLQTQLAQFQRRLNEYNVFVSSGN 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01546 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 454 IPR027417 -
Pste9g01546 704 SMART kinesin_4 133 466 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste9g01546 704 Pfam Kinesin motor domain 141 454 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste9g01546 704 PANTHER KINESIN-RELATED PROTEIN 6 46 698 IPR027640 GO:0003777|GO:0007018
Pste9g01546 704 MobiDBLite consensus disorder prediction 567 585 - -
Pste9g01546 704 ProSiteProfiles Kinesin motor domain profile. 135 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste9g01546 704 ProSitePatterns Kinesin motor domain signature. 357 368 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pste9g01546 704 Gene3D Kinesin motor domain 115 457 IPR036961 -
Pste9g01546 704 MobiDBLite consensus disorder prediction 465 492 - -
Pste9g01546 704 Coils Coil 634 654 - -
Pste9g01546 704 CDD KISc_KIF2_like 135 454 - -
Pste9g01546 704 MobiDBLite consensus disorder prediction 465 496 - -
Pste9g01546 704 PRINTS Kinesin heavy chain signature 358 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste9g01546 704 PRINTS Kinesin heavy chain signature 324 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste9g01546 704 PRINTS Kinesin heavy chain signature 408 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste9g01546 704 PRINTS Kinesin heavy chain signature 215 236 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste9g01546 704 FunFam Kinesin-like protein 116 466 - -
Pste9g01546 704 MobiDBLite consensus disorder prediction 514 585 - -
Pste9g01546 704 MobiDBLite consensus disorder prediction 544 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01546 Pste-Chr9 15507570 15513998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01546 15 454 Calmodulin-binding Proteins AT5G65930 30.905 2.50e-42 164