Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01542 CTACCACACACTCCCTACCCTGCCTCAAATTACTCCATAAACCTGGTTGGTACTTGTCACTCAGCAGATAAATATTCAGTGAAGTGGGTTAGGATGGCAAATCTCAGCAATGGCCACTTACAATCCTTTGTCAAGATTCCCACAGTAAAGTTTACCAAGCTTTTCATCAATGGAGAATTCCTAGATTCTATTTCAGGAAAAAGGTTTGAGACTGTTGACCCAAGAACAGAGGAAGTGATTGCTGAAATAGCAGAGGCGAGGAAAGAAGATGTTGATATTGCTGTGAAGGCCGCACGTGAAGCATTCGATAGTGGTCCATGGCCACGCATGCCCGGTGCTGAAAGAGCAAAGATTATGCTGAAATGGTCAGAGCTAATTGAACAGAACGCAGAAGAAATAGCTGCATTGGACACCATTGATGGGGGAAAGCTATTCAGTTGGTGTAAGGCAGTGGATGTTCCTGAAGCATCCAATATCCTACGTTACTATGCTGGTGCTGCTGATAAAATTCACGGAGATGTGTTCAAAACATCTCGTGACCTTCAATTGTATTCTCTGATGGAACCTGTTGGTGTTGTTGGACACATCATACCTTGGAATTTCCCTACCGTCATGTTCTTCGCTAAGGTTGCCCCGGCCTTGGCTGCTGGCTGCACCATGGTCATCAAGCCTGCTGAGCAAACACCGCTCTCCTCACTCTTTTATGCTCACCTTGCTAAGCTGGCTGGTATTCCAGATGGAGTGCTCAATGTAGTCCCCGGCCTTGGCTCAATTGCTGGAGCTGCAATAAGCTCACATATGGAAATTGATGCGGTCAGTTTTACTGGTTCAACAGAAACAGGTCGTAAAATAATGCAGGCTGCTGCCTTAAGCAATTTGAAACCTGTTTCACTCGAATTAGGAGGCAAGTCTCCAGTTTTAATTTTTGATGATGCTGATGTAGACAAAGCTGTTGACCTTGCTCTCTTTGGCATCCTACACAATAAGGGAGAAATATGCGTTGCATTCTCCAGAGTTTATGTCCAGGAAGGGATTTATGATGAATTTGAGAAGAAGGTAGTGGAGAAGGCTAAAACTTGGGTAGTGGGGGACCCTTTTGATCCCAAAGTTCAGCAAGGACCCCAAACCAGTAAGGAACAATTTAATAAAATTCTTTCCTATATTGAGCATGGAAAGAGAGAAGGAGCAACACTGTTGACTGGGGGTAAGCCAGTGGGTAACAAGGGATACTACATCGAGCCTACTATTTTTGCCAATGTTAAGGAGGACATGCTAATTGCACAAGAGGAAATTTTTGGACCTGTGATGGCACTTTCTAAGTTCAGGAACATTGAAGATGCAATTAAGAAAGCCAACAGCTCCAAATATGGCCTAGCAGCAGGGATTGTCACCCAGAACTTGGATATAGCCAATACGGTATCCAGGTCCATCTGTGCAGGCATCATTTGGATCAACTGCTTCTTTGCCTTTGATATTGACTGTCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTATGGACTGGAAGCACTTCATAAGTATCTTAAAGTTAAATCTGTTGCAACTCCTATATATAATTCTCCTTGGCTTTGAAACTTTCATCTGAGTGTTGTATCTAAACATATACATCATTTGGATAAACTACTTAATACTTTAATTTTTCTTTTTTTGGATTCTAACA 1687 0.4268 LPHTPYPASNYSINLVGTCHSADKYSVKWVRMANLSNGHLQSFVKIPTVKFTKLFINGEFLDSISGKRFETVDPRTEEVIAEIAEARKEDVDIAVKAAREAFDSGPWPRMPGAERAKIMLKWSELIEQNAEEIAALDTIDGGKLFSWCKAVDVPEASNILRYYAGAADKIHGDVFKTSRDLQLYSLMEPVGVVGHIIPWNFPTVMFFAKVAPALAAGCTMVIKPAEQTPLSSLFYAHLAKLAGIPDGVLNVVPGLGSIAGAAISSHMEIDAVSFTGSTETGRKIMQAAALSNLKPVSLELGGKSPVLIFDDADVDKAVDLALFGILHNKGEICVAFSRVYVQEGIYDEFEKKVVEKAKTWVVGDPFDPKVQQGPQTSKEQFNKILSYIEHGKREGATLLTGGKPVGNKGYYIEPTIFANVKEDMLIAQEEIFGPVMALSKFRNIEDAIKKANSSKYGLAAGIVTQNLDIANTVSRSICAGIIWINCFFAFDIDCPFGGYKMSGFGRDYGLEALHKYLKVKSVATPIYNSPWL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01542 532 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491
Pste9g01542 532 Pfam Aldehyde dehydrogenase family 65 522 IPR015590 GO:0016491
Pste9g01542 532 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 43 523 - -
Pste9g01542 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 302 491 IPR016163 GO:0016620
Pste9g01542 532 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 298 305 IPR029510 GO:0016491
Pste9g01542 532 FunFam Aldehyde dehydrogenase3 302 491 - -
Pste9g01542 532 FunFam Aldehyde dehydrogenase, putative 494 520 - -
Pste9g01542 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 56 520 IPR016162 GO:0016491
Pste9g01542 532 SUPERFAMILY ALDH-like 44 528 IPR016161 GO:0016491
Pste9g01542 532 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 56 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01542 Pste-Chr9 15434255 15437614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01542 44 532 Aldehyde Dehydrogenase Gene Family AT3G24503 68.776 0.0 716