Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01541 GCTAAAAAGGCATTTACACAAACATGGCTAGTCTCTCCAATGGCCACGACACCTCTTTCTCCGTGGAGATGCCCCTCATCAAGTTCACCAAGCTCTTCATTAATGGCCGATTTGTTGATTCCCTTTCAGGAAAGGAGTTTGAAACAATAGATCCAAGAACAGGGGAAGTGGCTGCCAGGATCGCCGAGGGAGTAAAACAAGACATTGACATTGCGGTTAAAGCGGCACGTGCTGCCTTCGACTCTGGCCCATGGCCTCGTATGCCCGCCGCTGAAAGAGCAAAAATTATGATGAAATGGGCAGAGCTAATTGATGAGAACGTAGAGGAAATAGCAGCATTAGATGTGATTAATGCAGGCAAATTGTATCATTGGTGCAAAGTTATTGACATTCCTGGAGCAGCAAATACTATACGTTATTATGCTGGTGCTGCAGATAAAATTCATGGAGAGGTCTTAAAAGCGGCTAGGGAGTTCCATGCATATACTTTGCTGGAACCAATTGGTGTTGTGGGACACATTATTCCTTGGAACTTCCCCAGCACCATGTTTGTTGCCAAGGTTGCTCCTTCCTTGGCTGCTGGTTGCACAATGGTCCTCAAGCCTGCTGAACAAACACCTCTCTCCGCCTTGTTTTATGCTCATCTTGCTAAGCTCGCTGGAATTCCGGATGGAGTGCTTAATGTAGTACCCGGATTTGGTCCAACTGCAGGTGTTGCAATAACCTCACACATGGACATTGATAAGGTGAGTTTTACTGGGTCAACAGAAGTAGGGCGTGACGTAATGCGTGCTGCAGCTAATAGTAATTTGAAACCGGTTTCACTTGAACTAGGAGGCAAGTCACCCCTCATAGTTTTTGATGATGCTGATGTAGAAAAAGCTGCTGAACTTGCTCTTTTGGGAATCTTATTTAATAAGGGAGAAATTTGTGTTGCAGGTTCCCGTGTGTTGGTTCAGGAAGGAATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAAGCAAAAGCGTGGGTGGTTGGTGATCCTTTTGATCCTAAAGTTCAGCAAGGGCCACAGGTTGACAAGAAGCAATTTGAGAAGATTCTTTGCTATATCGAGCATGGAAAGAGAGAAGGAGCCACCCTTTTGACAGGGGGAAAAAGAGTGGGCAACAAGGGTTACTACATTGAGCCTACAATTTTCTCCAATGTTAAGGAGGACATGCTTATAGTACAAGATGAAATATTTGGCCCTGTGATGGCTTTGATGAAGTTTAAAACTATTGAGGATGCAATTAAGATTGGCAACAATACCAGATATGGCCTAGCATCAGGAATTGTGACAAAGAGTTTGGATACAGCCAACACTGTGTCAAGGTCGATTCGTGCAGGCATTGTTTGGATCAACTGCTACTTTGCTTTCGGAAATGACATTCCTTATGGAGGGTACAAGATGAGTGGATTTGGAAGAGATTTCGGATTGGATGCCCTACACAAGTATCTACAAGTTAAATCTGTTGTAACTCCCATTTATAATTCTCCTTGGCTTTGAATATCTCCTTTCTCCTTTTTGTTCTGTGGGTATAAACAACAGTGCACAATGCAGGAGCTGTTACATTTACATACTTCGTTATGTTATAAAATTGGGCATGTTACATGCTTCCCACTTTGTTTAAATTTTTATGC 1666 0.4316 MASLSNGHDTSFSVEMPLIKFTKLFINGRFVDSLSGKEFETIDPRTGEVAARIAEGVKQDIDIAVKAARAAFDSGPWPRMPAAERAKIMMKWAELIDENVEEIAALDVINAGKLYHWCKVIDIPGAANTIRYYAGAADKIHGEVLKAAREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVAPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGPTAGVAITSHMDIDKVSFTGSTEVGRDVMRAAANSNLKPVSLELGGKSPLIVFDDADVEKAAELALLGILFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILCYIEHGKREGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIGNNTRYGLASGIVTKSLDTANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGLDALHKYLQVKSVVTPIYNSPWL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01541 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
Pste9g01541 502 Pfam Aldehyde dehydrogenase family 31 492 IPR015590 GO:0016491
Pste9g01541 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620
Pste9g01541 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 11 492 - -
Pste9g01541 502 FunFam Aldehyde dehydrogenase3 272 461 - -
Pste9g01541 502 SUPERFAMILY ALDH-like 14 498 IPR016161 GO:0016491
Pste9g01541 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 490 IPR016162 GO:0016491
Pste9g01541 502 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 26 292 - -
Pste9g01541 502 FunFam Aldehyde dehydrogenase, putative 464 490 - -
Pste9g01541 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01541 Pste-Chr9 15407431 15415966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01541 13 502 Aldehyde Dehydrogenase Gene Family AT3G24503 70.265 0.0 731
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00357 3 1853703 1868181 Pste9g01541 9 15407431 15415966 PCT