Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01538 ATGGACGACATGGAAGACGATGCAAGGTACCCTCCGAAGTCCTTCTCCCTGAACCGCCAGAACCGCCACAAACACCCCATGCGCGCCGCCCCCTACCACCGCCCAATGCCCACGCGCTACGAGCAAGTCGAAGACGACGACGAAAACGAAGCGGAAGATTTCGACGACGACGAAGGTGAAAACGGTTACGACGATGAAAACGACGTGGCGTATCCTCGGATCCCGAAGAAGCGCAAGGTAGTCGGTGCAGGAGGCTCCTACGAGTTCGCGCCACGTGTGAAATTTTCGTACGGTTCCCGGGGTTCGGGTTCCGGCGAAGAGTGGAACGAGCACGAGACTTTCGTGTTGTTGGAAGTTTGGGGTGACAAGTTCCTTCAACTCGGGAGGAACAGTTTGAGATCGGAGGAATGGCACGAGGTTGCGGAAAAGGTTTCGGAGGAATTAAAGTCAGAGAGAACGGTGACGGAGTGTAGGAGCGTATTTGATAAGCTGAAGAGAAGGTACAAGAAGGAGAAAGGTAGAATGGATGAAATGGGTTTGGGGTCTTGCAAATGGCCCTACTTTAAGAAGATGGACATGTTGATGGCTTCCTCTGCAAGACAAGAGTATGGGCTTGCTTGTGGGGTGGATTCTGGGGAGTATGTGTTTATGAACACTAGGGTTTACTTGAACAGATCCAATGGATTTGATGAGATGCGGGACAGTCCGGGGGAGTCTGAGAGTGATGATGATGACTACGAGGAAGAGGATTGCGGCGGTGGCGGTGGCGGCGGCGGCGGCGATGACGATGATACTTCGTTCCGTGTCTTGGCGGATTCCATACAGAAGTTTGGGAAGATATATGAGAAGATAGAGAACAGCAAGAGGCAGCAGATGATGGAGCTGGAGAAGATGAGGCTGGATTTTAACAGGGAATTGGAGCTGCAGAAGAAGCAGATTCTTGAGAGGGCGCAGGCCGAGATTGCCAAGATTCAGGAAGAATATGATCTTGGAAAGGGTGGTGATATCTGGATGGAGAGCACCGCTTCTGGAGGAAAGATTGTCAACACACTAGCTGAAGAAGAGCTACACCCAGTAAGGTTTGCAACCCTTGCATTCCTTGATAATGGGGCAGTTGATTAGAAAGAGTAATATTTTTGTAAGGGTGACTTGCAATAAGTAGGGATCACTTTTGAAATTTGAATAATTTGCGGCACATTTGTAGCTCAGTTCATCCAAATACGTGCCTTTGGATGGAAATTATTAATTAAATGTTAATAGTATGCTAATAACTTAATTAAGCTGGATTTATTATTATATGACCC 1304 0.4854 MDDMEDDARYPPKSFSLNRQNRHKHPMRAAPYHRPMPTRYEQVEDDDENEAEDFDDDEGENGYDDENDVAYPRIPKKRKVVGAGGSYEFAPRVKFSYGSRGSGSGEEWNEHETFVLLEVWGDKFLQLGRNSLRSEEWHEVAEKVSEELKSERTVTECRSVFDKLKRRYKKEKGRMDEMGLGSCKWPYFKKMDMLMASSARQEYGLACGVDSGEYVFMNTRVYLNRSNGFDEMRDSPGESESDDDDYEEEDCGGGGGGGGGDDDDTSFRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQEEYDLGKGGDIWMESTASGGKIVNTLAEEELHPVRFATLAFLDNGAVD 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01538 373 MobiDBLite consensus disorder prediction 1 69 - -
Pste9g01538 373 MobiDBLite consensus disorder prediction 236 251 - -
Pste9g01538 373 MobiDBLite consensus disorder prediction 227 265 - -
Pste9g01538 373 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 99 326 IPR044823 -
Pste9g01538 373 Pfam Myb/SANT-like DNA-binding domain 107 193 IPR044822 -
Pste9g01538 373 Gene3D - 108 170 - -
Pste9g01538 373 MobiDBLite consensus disorder prediction 43 65 - -
Pste9g01538 373 Coils Coil 281 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01538 Pste-Chr9 15372203 15375416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01538 108 327 Trihelix Transcription Factor Family AT1G54060 29.008 9.98e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste9g01538 Myb_DNA-bind_4 3.3e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01538 9 15372203 15375416 Pste9g01538 9 15372203 15375416 ECH