Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01533 AGGAAGAGATGACGAGTCGGATGAAGGAAGACGAGAAGAACGAGCGTGTGATTCGAGGTCTTCTCAAGCTTCAGCATAATCGCAGATGCATTAATTGCAATAGTCTGGGACCACAATATGTGTGCACAAATTTCTGGACGTTTGTTTGCACGAACTGTAGTGGAATACACCGGGAATTCACTCATCGAGTAAAATCAGTTTCAATGGCTAAGTTTACTTCACAAGAAGTTAATGCACTTCAAGAAGGAGGGAATCAGCGTGCGAGAGAAATTTATTTTAAAGAATGGGATGCTCAACGTCATTCTTTCCCTGATAGCAGTAATGTTGACAGGCTCCGAGATTTTATTAAGCATGTTTATGTGGATAGAAGATTCACCGGAGAGAAGGCCAATGACAAACCACCAAGAGTCAAAGCGGGTGACAAAGATGATTTCTATCAAGGAGGATCTAAAAGCCCTCCCTATGAGGACACATATGACCGTCATTATAGTGACAGATCTAGTCCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGTGATTATAAGAGAAGTCCTGGTCGCCCTCCAATAATTAATGATTGGCGTCGTGAAGATCGTAGAATATCAGATGGAGATTATAAGGTGGAAAGCCAATCTCCTGAGCGAGCCAAAGATGTGGGTTCTTCTAGCCCACCTGTAGTCCGACCTGTTAGAGATATTTTGGGAGAAAATGTAGTACCCCTTCGGATAAGTGAACCTCCCAAACCAAACAGTGGAAGACCTTCTGATAGCTCAGCACTAACACAGAGAACTGCGTCTTCCAGTAACTCGGCTTCTGGCAATGAAAATCCAGTAGATGTTAAGCTTGAGAGTACTAAGAGCCTTATTGATTTTGATACTGATCCTGAACCTCCAGTAGCTCCATCAATTTCTCAAGCCCAACAAACTACTGTGCCTCAACCTGTTGTGGAGCCAGCAAATCCCAGTAATGACAATTGGGCCTCTTTTGATGTTGCTTCTGCAGCAAAACCAACGCCAAGCTCCTCTAATTTAAATTCACTTGAATCAATGTTGTCCCAATTGTCTGTGCCAGCATCTTTACCTCCCCAAGTTTCTGGACCTATTCCAGCATCATCTCTTACTTCTACTTCTGGAGCTGCAAGTGTCGGTGGTTTCTCCGGTTTTCCACCCAGTAATGCTTCAGTACCATCTCCTGGATTAGCATCTATATCATCTCTTAATAATGCAGGACAGTGGGCTGGTTTGCAGCAGCAGCAACCATTGTTCCCTGCTGCTGTTAATCAGCCTACTACACAACAATTTGCACCACCTTTAGGTGGAGCAGCAAATAATCAGCCATGGAATGTACCTTCTGCAGCCACAGTGCAAGGTCATGCTGCCACACCAATGCTGCATACATACCATCATGCCTCAAAGCCTGCCAATGAGGCTATATCCAGCATTGTTTCTCAACCTCCTGCTTTGGAAGTTAAAGCAAGTGGAAGGAAAGAACTTCCTGAGGATCTGTTCACTGTAAAATATTCTTCCTTCCCTGCTCCTGTTCTAGGTTGGCAAATGGGTGTTCCTCATGGCATGGCTATCTCAATGCAATACAATAATGTAGTGCCTGTGCCAAGTTTTCCTCAGCCATCAAAGTCAGGAAATCCATTTGATGTCAGCAGTGAACCAACCCCAAATCAAGCTCCAACTTTTCCTTCCATGTCATCCTTGCAAGGTGCCTTGCCTAGTGTAGCACCTGCAGGTGCAGTGCACCCTTCAAGCATGGGTAATCCGACACATGGATGGACTCCACCCCCGTCATCAGCTTTTCTACCAGTTCCGCCTGCACAAGCACGAATGCATGCATCTGCATTGGGACCAAGAGCATACATGGGGCAACAAAGGCCGACCAGCGTACCAATGCCAAGGCAAGAAGTTGGGAATTTTGGTAACCAAGGAGCTGTCTACGGCTTGTCAAATCCGGGTCAGCAGCTGGCTGGTAGGTTATCAAACGCTCCATCCTCTAACTCATTGCCAACAGGAGGGAACCCATTCGGATAATGTGAAGAATTGTCCACCTAGAATTGTAAAGTCAAGCGTTAACTTGTTGCTCCATGTACAAATATGTGCAAGTTTCGGCTTCAATTTCTGTTGTCAGTCAGATTGAAACACTTACGCGTAATGAGAGGTTTATGGTAAGCCCCGGTTCGGAAGCAAATATTTGCATTTGGCCGTGTAAATTTTTATTTCTATAGGAAAGGTGGAGACAAAATCAATCTACCTTCTTGGAAGAGGGAAAAGACTGAGATAAAGAACGGATGAATGAAAGGGGTGCAGTCGTGCAGGGAACCATTCGAGGAGACATAATTTTTTCTTTCTTTTTCTGGGTGCACCCATATGTTGTTCATTTTGTAATTGTGGCATAGATTGGTGGTGGTGTTTGCTAGTTTGGTGCCCCCTACTTGTGTTCTGTTTTGGTTTTACTATATTGTATGATTTTGTAATCTCACAATTTTGCTAGGGTTTTTCCTTTTTATGGATACTACATGAAATGAAATCATCTGCCTCTGCTTTTTTTCCC 2574 0.4413 MTSRMKEDEKNERVIRGLLKLQHNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVNALQEGGNQRAREIYFKEWDAQRHSFPDSSNVDRLRDFIKHVYVDRRFTGEKANDKPPRVKAGDKDDFYQGGSKSPPYEDTYDRHYSDRSSPGGRSPGYDQESRQYGDYKRSPGRPPIINDWRREDRRISDGDYKVESQSPERAKDVGSSSPPVVRPVRDILGENVVPLRISEPPKPNSGRPSDSSALTQRTASSSNSASGNENPVDVKLESTKSLIDFDTDPEPPVAPSISQAQQTTVPQPVVEPANPSNDNWASFDVASAAKPTPSSSNLNSLESMLSQLSVPASLPPQVSGPIPASSLTSTSGAASVGGFSGFPPSNASVPSPGLASISSLNNAGQWAGLQQQQPLFPAAVNQPTTQQFAPPLGGAANNQPWNVPSAATVQGHAATPMLHTYHHASKPANEAISSIVSQPPALEVKASGRKELPEDLFTVKYSSFPAPVLGWQMGVPHGMAISMQYNNVVPVPSFPQPSKSGNPFDVSSEPTPNQAPTFPSMSSLQGALPSVAPAGAVHPSSMGNPTHGWTPPPSSAFLPVPPAQARMHASALGPRAYMGQQRPTSVPMPRQEVGNFGNQGAVYGLSNPGQQLAGRLSNAPSSNSLPTGGNPFG 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01533 681 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Pste9g01533 681 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Pste9g01533 681 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Pste9g01533 681 MobiDBLite consensus disorder prediction 542 575 - -
Pste9g01533 681 MobiDBLite consensus disorder prediction 191 216 - -
Pste9g01533 681 PANTHER ARFGAP/RECO-RELATED 1 681 IPR044820 GO:0005096
Pste9g01533 681 MobiDBLite consensus disorder prediction 124 142 - -
Pste9g01533 681 MobiDBLite consensus disorder prediction 124 329 - -
Pste9g01533 681 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Pste9g01533 681 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Pste9g01533 681 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Pste9g01533 681 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Pste9g01533 681 MobiDBLite consensus disorder prediction 302 329 - -
Pste9g01533 681 MobiDBLite consensus disorder prediction 252 283 - -
Pste9g01533 681 Gene3D Arf GTPase activating protein 1 133 IPR038508 -
Pste9g01533 681 MobiDBLite consensus disorder prediction 627 681 - -
Pste9g01533 681 CDD ArfGap_AGFG 12 122 - -
Pste9g01533 681 MobiDBLite consensus disorder prediction 542 601 - -
Pste9g01533 681 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Pste9g01533 681 MobiDBLite consensus disorder prediction 648 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01533 Pste-Chr9 15241859 15249917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01533 12 122 C2H2 Transcription Factor Family AT4G21160 31.452 2.19e-11 63.9