Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01530 TCGCAACGCAAACTAACAACAACAACCACCACCACCACAACAACGTTTGTGTTTGGTCGTGTTGTGTTGTGTTGTGTTGTTGGGGATTCATGCCAATAAGCCCCTGATTCCTCTCCCCATTCTCCCAAGAGAAGGGTCAATCTGTTACATTGTTGAGCACTTACAAATGGATTTAGAAGACAAGTTCCTTGCTAAAGTTTCTGGTGTTCAAAGCCTTTCATCCAGTGCGCAAAGTACTCCAGAAAAAAATGGACATTCAGATGACGCTTCAAGAAGTTCGGAGCTTCTTCAGGAGTTCCTGAAATCTGGTACTAAGAAAGAACTTTTACGAAGTTGCTTTGATAAGGACAAAAAGAGCATTTCTTCTAAAAGCAGGATGGCTGAAACTAAGTCAACCACTAAGATTGTCAAGAAACAGGACTCAAAAAAAGTTTCTGGCCTCAGCAATCAGCCTTCCAGGAAGCAACATCGCAAAGGAGAAAATCCGGTGCGGTTTGTACCACCTCCTGATTCACCTAGTGATTTTGGACATTCAAACTCCTGGGTCTGTAAGAATTCTGCCTGCCGTGCTGTTCTCTCTAAAGATGACACCTTTTGTAGAAGGTGCTCTTGTTGTATTTGCCATCTTTTTGATGATAACAAGGATCCCAGCCTTTGGTTGGTATGCACATGTGAATCTTCTCAAGGGGACTCCTGTGGGTTGTCTTGCCATATTGAGTGTGCTCTTCAACATGAAAAAGTAGGAGTTGTTGATCATGGACAACTGATGCAACTAGATGGTGGTTTTTGTTGTGCATCCTGCGGTAAAGTTAGTGGGATACTTGGATGTTGGAAGAAGCAGCTAAATATAGCTAAAGATGCTCGGCGTGTAGATGTACTATGTTACAGGATATATTTGAGTTACAGGCTTTTGGATGGTACTTCAAGATTTAAAGAATTGCATGAAATGGTAAAAGAGGCAATGGCTAAACTGGAAACTGAAGTTGGTCCTGTTAATGGGGTTTCTTCCAAGATGGCACGTGGGATTGTCAGCAGACTCCCCATTGCCAGTGATGTACAAAATCTCTGCTCTCTCGCAATTGAGAAGGCTGATGAATGGCTGGCCATTGTTGCCAATGTAAATCTAGAATCCGGAGAGGGTTCACTTCCCGCGGCCTGCAAGGTTGTGTTTGAAGAGGTAACAGCTTCCTCAGTTAAAATCATTTTAATTGAACTGCCAAATGCATCTTCTGGGGACATTAAGGGATACAAGCTTTGGTATTACAAGAGTAGGGAGGAATCACACAGTAAAGATCCTGTTTGTGTGTTTCCGAAAACTCAGAGAAGGATTTTGATATCCAACCTCCTGCCTTGCACAGAATATACCTTTCGTTTCGTATCTTTTACAGATACGGGTGACCTGGGTCATTCTGAGGCTAAGTGTTTCACCAAGAGCATTGAAATATTGGAAAAGAATTCATCTTCATCAGTTGCCGTGAATCATAAAAAGGATAACCTTCAAACTGAATGCAATTCTTCTGGCTCCAAAATGGAGCCCAATCCCACAACGGCAGACTCTGGATTTAAGGTTCGAGACCTTGGAAAAATATTGCATCTTACTTGGGCTCAAGAACAAGGTTGCTTTGAAGGGTTTTGCTGTGATGACAAGAGAAATTGCTGCGGGCAAAGTGAAATGATCAAGCCTAGTAATCCACAAGAGCAGTTGCCTTCAGTTTCACGTGGCCTTGATCTAAATGTTGTTTCAGTGCCTGATTTGAATGAAGAACTTATACCTCCGTTCGAGTCTTCCAGGGATGAAGATAATGATTGCACTTTGCCACAGGCTGTTGAGGCAGATGATGATGCTGCTTCTCATGATTTAGAGAAAAATTTAGCAAGATCACACGGTAGTGGTGGTTCCCAAACTTGGAACCATGGACCAACGGGAGAAGTGCCAGCTGTTGACTCTCGTGGAGATGCATGTAGGAAAAGGATGACAAGCCCAAATGAAGAGACACATGATTGCGACAGCACTTTGATAAATGATTCTCCTTTACGTGCATCTGATGGTCCATTCTCCTTAGATGAGAACTTTGAATATTGTGTGAAAGTGATTCGCTGGCTAGAATGCCAGGGTCATATCAAGCAGGAATTTAGGTTGAAATTGCTGACATGGTTTAGTTTGAGGTCGACAGAACAAGAACGAAGGGTGGTAAATACATTCATTCAAACGCTGATTGATGATCCAAGTAGTTTGGCAGGGCAACTAGTTGATTCGTTTTCTGATATTATATCCAACAAGAGGCCAAGAAATGGGTTCTGCAATAAATCTGTGGCATCAAACTACCGCCATTTCAAATCACCCCCGATTGTTTCTGCCCTGTACATGCATTTTTTATTACTCACCGTGATTCATTTTATTGGGACAACGTTTTGTCCTGCTAAAAGGATTTGCATTGATGATTGCGCAGACAGTAACTCATTCATTCTTGAAGGGAAGAAGGATCTT 2488 0.4232 MDLEDKFLAKVSGVQSLSSSAQSTPEKNGHSDDASRSSELLQEFLKSGTKKELLRSCFDKDKKSISSKSRMAETKSTTKIVKKQDSKKVSGLSNQPSRKQHRKGENPVRFVPPPDSPSDFGHSNSWVCKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCTCESSQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGFCCASCGKVSGILGCWKKQLNIAKDARRVDVLCYRIYLSYRLLDGTSRFKELHEMVKEAMAKLETEVGPVNGVSSKMARGIVSRLPIASDVQNLCSLAIEKADEWLAIVANVNLESGEGSLPAACKVVFEEVTASSVKIILIELPNASSGDIKGYKLWYYKSREESHSKDPVCVFPKTQRRILISNLLPCTEYTFRFVSFTDTGDLGHSEAKCFTKSIEILEKNSSSSVAVNHKKDNLQTECNSSGSKMEPNPTTADSGFKVRDLGKILHLTWAQEQGCFEGFCCDDKRNCCGQSEMIKPSNPQEQLPSVSRGLDLNVVSVPDLNEELIPPFESSRDEDNDCTLPQAVEADDDAASHDLEKNLARSHGSGGSQTWNHGPTGEVPAVDSRGDACRKRMTSPNEETHDCDSTLINDSPLRASDGPFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFCNKSVASNYRHFKSPPIVSALYMHFLLLTVIHFIGTTFCPAKRICIDDCADSNSFILEGKKDL 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01530 774 MobiDBLite consensus disorder prediction 62 86 - -
Pste9g01530 774 MobiDBLite consensus disorder prediction 62 118 - -
Pste9g01530 774 Gene3D Immunoglobulins 325 424 IPR013783 -
Pste9g01530 774 MobiDBLite consensus disorder prediction 13 39 - -
Pste9g01530 774 Pfam Fibronectin type III domain 332 413 IPR003961 GO:0005515
Pste9g01530 774 SUPERFAMILY Fibronectin type III 332 411 IPR036116 GO:0005515
Pste9g01530 774 CDD FN3 332 411 IPR003961 GO:0005515
Pste9g01530 774 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Pste9g01530 774 MobiDBLite consensus disorder prediction 594 615 - -
Pste9g01530 774 MobiDBLite consensus disorder prediction 13 28 - -
Pste9g01530 774 PANTHER VIN3-LIKE PROTEIN 2-RELATED 16 714 IPR044514 GO:0010048|GO:0040029
Pste9g01530 774 MobiDBLite consensus disorder prediction 569 620 - -
Pste9g01530 774 ProSiteProfiles Fibronectin type-III domain profile. 329 426 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01530 Pste-Chr9 15173471 15181985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01530 124 710 PHD Gene Family AT3G24440 49.667 3.20e-180 527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01530 9 15173471 15181985 Pste9g01530 9 15173471 15181985 ECH
Pste3g00345 3 1743027 1751405 Pste9g01530 9 15173471 15181985 PCT