Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01503 CAAGTGAGTAAGAACAAACTATAAGACCCCAGTGTGCTTCTGTCTCATCACATTCTCAAGTCTCAGCATAACCAATAATTGATTTTGAATCATTTGAGTCTCTAAATGCAAACACTGGCCTCTCCGTCAACATTGTTGGTAATTTACAATTGCATTTGCAACCAAAATTAATTGATCGGGTTCATCCTATGACCAAATACGAAATGAAAGAAGCAAGTGCCTTGGGAGCTAAAACAGCACGAGCATGCGAGAGCTGCGTAAAAGTAAGAGCACGGTGGTATTGTGCAGCTGATGATGCTTTCCTTTGCCATGGCTGTGACAGCATGGTTCACTCAGCAAACCAATTAGCAAGCAGGCACGAGAGGGTTAAGCTTCAAGCTGCATCCTCTAAGGTCAACCACTCATTGACCCCTCACCATAACAATAAGGTAGCATGGCACAGTGGATTCACACGCAAGGCCAGAACCCCTCGCCACAACAAGCACTCATCGCTTCAACAACAACAGCTGCAACAAAAACCATTACACCAAGAAGAAGAAGAAGAAGAAGAAGACGTGTTTTTCAATAATATTAATCTCCCTCTTGTGCCAGAGCTTGGAAGTGAAGAACCATTGCTCCATGATGAGACTGAGGAGCATCTGCTGTGTCGCGTGCCCGTGTTTGATGCTGCCCTTTGTAGCATATACAATGAAGTGAAGGATGAGGTTGTAGCCGGTGAAGAAGCCTTTGACTTGGAAAACTTTTCTTCTGACTTTCTACCATCAGATATGGATCTAGCTGAGTTTGCTGCTGACGTGGAAAGCTTACTTGCAATCGGGGATTCATCTGAACACGTGAAAGGATCCCAACTGCTTCTTGATAGCAAAGAAGATATGGAAGCATGTGCTAATGACGCAATGGTGAAGGTTAAAGATGAAAAGGAAGATGATGAAGAAGAAGAACTTGATGCTTGTCATTTGGAATCGATTCTTGACGTGAACAGCGAGGCATTTAACTGGAATATTGCCGATTCAGAATCACCTGCACAGGAACAAGAAGAGGTGAGTAAAGTGGGAACTAAGAAGGACATATTTTTGAGGTTGAACTATGAAGAGGTCATTACTGCTTGGGCCAGCCAAGGTTCTCCATGGACTACAGGAACCCCACCTAAGTTCAACTCTGATGATTGTTGGCCAGACTTCTTGGGTTCGAGTGGTGAGGATGTTGAATGCTGTTATGGGGAAATGAGAAGCTTAAGGGGGCATGCTCATGCAGATGGGGGAAGAGAAGCAAGAGTGTCAAGGTACCGAGAGAAGAGAAGAACACGTTTATTTGCAAAGAAGATACGGTATGAAGTGAGGAAGCTGAACGCGGAGAAAAGACCTAGAATGAAAGGTCGATTTGTGAAGAGGTCATCTTTTGCTGGAGGCACTGCTTTGCCAGCTTAATTATCAATCACACCACTGACATCAAAGTGATCACATGGAAAAGTTAATTAGATTAATTATTAGTTACTTGGTTTTTCCATGTATGTATAATGCCATCACTAGATCAGGTTTCTCTTGCTTGGGATATTTATTGCTTTCTCTAGCAGGTCTAGTACTAATGGAAATGGTAGCAACTCCATCTCTGCATTTTGAAGGCTTTGGTAAAATATATTTCGGAAGCCCTTTTTCAATGTTGTTAATTATGACTATGATATGTATAAGATTCTGTAATCTATTATGATGTTATGTTTACCTTAACTCTTTGAGGTTACTGGTTCATGCTAATATCAG 1757 0.4206 MTKYEMKEASALGAKTARACESCVKVRARWYCAADDAFLCHGCDSMVHSANQLASRHERVKLQAASSKVNHSLTPHHNNKVAWHSGFTRKARTPRHNKHSSLQQQQLQQKPLHQEEEEEEEDVFFNNINLPLVPELGSEEPLLHDETEEHLLCRVPVFDAALCSIYNEVKDEVVAGEEAFDLENFSSDFLPSDMDLAEFAADVESLLAIGDSSEHVKGSQLLLDSKEDMEACANDAMVKVKDEKEDDEEEELDACHLESILDVNSEAFNWNIADSESPAQEQEEVSKVGTKKDIFLRLNYEEVITAWASQGSPWTTGTPPKFNSDDCWPDFLGSSGEDVECCYGEMRSLRGHAHADGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRSSFAGGTALPA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01503 412 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 9 403 - -
Pste9g01503 412 MobiDBLite consensus disorder prediction 65 81 - -
Pste9g01503 412 ProSiteProfiles CCT domain profile. 359 401 IPR010402 GO:0005515
Pste9g01503 412 Pfam CCT motif 359 401 IPR010402 GO:0005515
Pste9g01503 412 ProSiteProfiles Zinc finger B-box type profile. 15 62 IPR000315 GO:0008270
Pste9g01503 412 Pfam B-box zinc finger 17 62 IPR000315 GO:0008270
Pste9g01503 412 SMART bboxneu5 15 62 IPR000315 GO:0008270
Pste9g01503 412 MobiDBLite consensus disorder prediction 64 83 - -
Pste9g01503 412 CDD Bbox1_BBX-like 19 60 - -
Pste9g01503 412 MobiDBLite consensus disorder prediction 90 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01503 Pste-Chr9 14770766 14773174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01503 9 401 C2C2-CO-like Transcription Factor Family AT1G25440 42.453 4.27e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Pste9g01503 zf-B_box 4.8e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00318 3 1551254 1553280 Pste9g01503 9 14770766 14773174 PCT