Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01490 ATGCACCTCATAGCTCAAACTCAAACTCAAACTCACATGGCTGAATTCACAGAAAATGTGCAAAGCATTAGACCCTCCTCGTTTCCATTCTTAGACATTGATCCAAGCATGGAACTCCTAAACCAATTCATCGGGATGAACCAGCATGTCCTTGAAAACTCAAACTTGACTATGCACAACTTGATCCCTTTCTCCTGTGACACCTTCTTGGGCCCTCAAGAACCTGAGTTTCCAGGAAACTTGGAAGAAAATTTCCCTGCCCTTGTCCATCATGTCAACCACAATGTACTTCCTGTTTCCCTCCCTATTTTCCAAGCAGAAAATGAGATCCACCAAGGTAAAAAGAGGAAATCAATGGATCTTCCCGAGACCAGTTCAGCTAACTCAACTCCTGCAGTTTCTGAGAGTGGAAGCAAGATCAAACACAGTTCTGGAAGAGGGAAGAGAGTAAAAAGTAAAACACAAGAGGAAAAAGCAAAGGAAGTGGTTCATGTCAGAGCCAGAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGAAAAATCAACGAGAAATTAAGATGCTTACAGAACATTGTTCCAGGATGTTACAAGACCATGGGTATGGCAGTGATGTTGGATGAAATTATAAACTATGTGCAGTCCTTGCAACATCAAGTAGAGTTCCTTTCTTTGAAGCTTACAGCAGCAAGCACCTTTTATGACTTCAATTCCGAGACAGATGCTTTGGAAACAATGCAGAGAGCAAGGGCATCCGAGGCAAAAGAGTTAGGCAAGTATAAGAGAGAAGGATATGGAGGAGCTTCTTTCTTTCAACCAACATGGCCCCTTTGACTTTAGTTTTGGATGTTTTAACTCAGCAGTTATACAAGACATGATATCACACTTCATCTGCTCTTTTACTTTCTACAAAGATCAATTTGTTTCCCCTCTGTGCTACTGGCACAAGTGGACATTCTTGCTTGTACAATCCTTCAGACATATGTAGAAATGAAATGGA 1015 0.4148 MHLIAQTQTQTHMAEFTENVQSIRPSSFPFLDIDPSMELLNQFIGMNQHVLENSNLTMHNLIPFSCDTFLGPQEPEFPGNLEENFPALVHHVNHNVLPVSLPIFQAENEIHQGKKRKSMDLPETSSANSTPAVSESGSKIKHSSGRGKRVKSKTQEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQRARASEAKELGKYKREGYGGASFFQPTWPL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01490 282 Coils Coil 248 268 - -
Pste9g01490 282 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 111 248 IPR024097 GO:0006355
Pste9g01490 282 FunFam transcription factor BEE 3-like 168 239 - -
Pste9g01490 282 MobiDBLite consensus disorder prediction 149 177 - -
Pste9g01490 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 237 IPR036638 GO:0046983
Pste9g01490 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 221 IPR011598 GO:0046983
Pste9g01490 282 Gene3D - 171 233 IPR036638 GO:0046983
Pste9g01490 282 MobiDBLite consensus disorder prediction 112 177 - -
Pste9g01490 282 SMART finulus 177 227 IPR011598 GO:0046983
Pste9g01490 282 MobiDBLite consensus disorder prediction 122 140 - -
Pste9g01490 282 CDD bHLH_AtBPE_like 161 246 - -
Pste9g01490 282 Pfam Helix-loop-helix DNA-binding domain 175 222 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01490 Pste-Chr9 14609014 14610801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01490 94 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 55.000 2.07e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste9g01490 HLH 0.00018 No_clan