Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01489 ATGTTTACTCCTTCAAAGAGCGTCATCTGTTCCGGTGATTATGATAATCAACTTAGAAGAGGGCCGTGGAGTGTTGAAGAGGATGGTCTTCTCATCAATTACATTGCCAATCATGGGGAAGGGAGATGGAATTTGCTGGCTACACGTTCAGGATTAAGGAGAACAGGAAAGAGTTGCAGATTAAGATGGCTAAATTATCTAAAGCCAAATGTTAAGAGAGGAAATTTAACCTCAGAAGAACAACTTTTGATTTTTGAACTCCACTCAAAGTGGGGCAACAGGTGGTCAAAAATTGCACAACAGCTGCCAGGCAGAACAGACAATGAAATCAAGAACTATTGGAGAACAAGGATTCAGAAACAAGCAAAATATGTGAAATTTGAGATGCATAGAACCATGGGATTTCTAGAATTTGTCAAGGGTCTGCAGATGACAAGATGTCTTCATAAAGCACAAGAATCATCTCCTTCAGCCATGTCAATCCAAGACCAAGCAATTCCCTTGCCTTTTGATGGTGCTTCTCATTATTCCTCATTTGGGATTGAGACAGCACCGACAACACAAATCACTAACCAGGGAGGTCTCAATCATTTGAATCAGCAGGAGCAAAACTCATGCATTTCCTCTTCAGATCAATCAGCAAATATACCAAACATGAGTCAGCCTTTGGGATACACATGCACTGCTAGTGAATTTCAGGCTTTAGATAGCTGTGACTTTGGCATCTGTTCATATGATGGCTATAGCTTAAATAACAATAATGCCTATGACATGGATGCCTTCAACCTGACAACCACAACGGCTGTTGAGCATCTGGAACTCCCACTGATTGATTGCCAAACATCAGAAACCAATTCGCTAAACAAGGAATTTTCATGTAGCACATGGAACATGGATGAATTAATTATGGCAATTTAG 918 0.4041 MFTPSKSVICSGDYDNQLRRGPWSVEEDGLLINYIANHGEGRWNLLATRSGLRRTGKSCRLRWLNYLKPNVKRGNLTSEEQLLIFELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRIQKQAKYVKFEMHRTMGFLEFVKGLQMTRCLHKAQESSPSAMSIQDQAIPLPFDGASHYSSFGIETAPTTQITNQGGLNHLNQQEQNSCISSSDQSANIPNMSQPLGYTCTASEFQALDSCDFGICSYDGYSLNNNNAYDMDAFNLTTTTAVEHLELPLIDCQTSETNSLNKEFSCSTWNMDELIMAI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01489 305 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Pste9g01489 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Pste9g01489 305 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 206 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pste9g01489 305 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Pste9g01489 305 SMART sant 72 120 IPR001005 -
Pste9g01489 305 SMART sant 19 69 IPR001005 -
Pste9g01489 305 CDD SANT 77 116 IPR001005 -
Pste9g01489 305 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Pste9g01489 305 FunFam Myb transcription factor 20 72 - -
Pste9g01489 305 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Pste9g01489 305 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Pste9g01489 305 Gene3D - 75 133 - -
Pste9g01489 305 CDD SANT 22 67 IPR001005 -
Pste9g01489 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 67 IPR017930 -
Pste9g01489 305 FunFam MYB transcription factor 76 118 - -
Pste9g01489 305 Gene3D - 17 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01489 Pste-Chr9 14594767 14595949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01489 15 160 MYB Transcription Factor Family AT1G68320 62.329 4.85e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste9g01489 Myb_DNA-binding 2.1e-14 CL0123