Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01487 TTGTGCCCCTGCTTGCGTAAGGCCCGCACACCCTCTGTCGCAGGCAACAGCGATGATCCCAACCGCCCCGGCGACTCCTTCGACCTAATCTTTGATTTCTACTTTCTCCAACTCGCCACCAACTTCTTCAACCACCTCAACCAGCTTGGTCATGGAGGCTTTGGATTGATGCCAAATGGTCAAGAAGTGGCGGTTAAGAAACTATCATTGGAATCTAGGCAAGGAGTTAGAGAATTCACTAACGAAGTTCGGCTATTACTCAGAATTCAGCACAAGAACTTGGTCACACTGCTGGGTTGTTATGCAGAAGGGCCTGAAAAGATGCTCGTCTATGAGTATCTGCCTAACAAAAGCCTTGATCGCTTTCTGTTTGATAAGAGGTCTTCATCATTGGACTGGGCAACGCAATTTAGAATAGTTATAGGTGTAGCAAGAGGACTTCTCTACCTGCATGAAGAGGCCCCAGAAAGAATTATCCATAGGGATATTAAAGCTAGTAACATTTTGCTGGATGAGAAATTAAATCCAAAAATCTCAGACTTTGGCTTGGCAAGGTTGTTTCCTGGGGAGGACAGTCATGTGCAAACATTTAGGATTTCTGGTACACATGGTTACATGGCCCCTGAATACGCATTGCATGGATATCTGTCTGTGAAGACAGATGTTTTCAGTTATGGAGTCCTGGTGTTGGAAATAGTTAGTGGGAGAAAAGACCATGATGTGCAGCTTAGTTCAGAAAAAGCAGATCTCTTGAGCTATAAGTCAATGGATGCAAATTTAGAATGGATATTGATTGATTATGCTCATGAACTTAGAATCTTGATACAACAGTCCAAGGGATTTGAGGCATGGTCACTTTATCAAGGAGGGGAGATAATGGACTTAATTGACCCAACCTTAGAAAATACAATGGCAGCAATATGCATTCAGCTGGGTTTGTTGTGCTGTCAAGCAAACATAATTGAAAGACCTGACATGAATGTTGTTCATCTCATGCTCTCAAGTGATTCCTTCACTTTGCCAAGGCCAGGTAAACCAAAAATCAAGGTCGTGTGGGACGTTGGACTACAACCACAACTTCTACTT 1086 0.4328 LCPCLRKARTPSVAGNSDDPNRPGDSFDLIFDFYFLQLATNFFNHLNQLGHGGFGLMPNGQEVAVKKLSLESRQGVREFTNEVRLLLRIQHKNLVTLLGCYAEGPEKMLVYEYLPNKSLDRFLFDKRSSSLDWATQFRIVIGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDSHVQTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKDHDVQLSSEKADLLSYKSMDANLEWILIDYAHELRILIQQSKGFEAWSLYQGGEIMDLIDPTLENTMAAICIQLGLLCCQANIIERPDMNVVHLMLSSDSFTLPRPGKPKIKVVWDVGLQPQLLL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01487 362 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 28 348 - -
Pste9g01487 362 Gene3D Transferase(Phosphotransferase) domain 1 114 339 - -
Pste9g01487 362 Pfam Protein tyrosine and serine/threonine kinase 59 239 IPR001245 GO:0004672|GO:0006468
Pste9g01487 362 FunFam Lectin-domain containing receptor kinase A4.3 114 351 - -
Pste9g01487 362 SUPERFAMILY Protein kinase-like (PK-like) 31 343 IPR011009 -
Pste9g01487 362 ProSiteProfiles Protein kinase domain profile. 43 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01487 362 SMART serkin_6 43 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01487 362 FunFam Putative DUF26-domain receptor-like protein kinase family protein 42 113 - -
Pste9g01487 362 Gene3D Phosphorylase Kinase; domain 1 22 113 - -
Pste9g01487 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01487 Pste-Chr9 14583053 14585627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01487 19 346 Receptor kinase-like Gene Family AT4G11490 42.773 7.94e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste9g01487 PK_Tyr_Ser-Thr 1e-40 CL0016