Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01484 CGCAGGTTTCTTAATCTTATCGCACTGACCAAACAACCCCTTCTTCTCCGCACAGAACTTGGAACGAAACAGCAACAAAAACGTTACTCTTGCAATCAGCGAGAGCGAAACAAACACATCATATCTCTCATACGCGCGCGCTCACGCGCACACGCCATTTCTAACTAACCAATCTCACACAATTGACGTGCCCTGCCCTGCAGACCTAGAGAGAGAAATTTTTCCCGGAAAATTGAGCCGTCAGAAAATTTCCCGACGGAAAAGAAAATAAAAGCACATGGCGACGACGCCGCTGACCGGGCTGCAGCACATGGACGGAGGCGGCGGAGTTGCAGTGCTGTCGAATCCGGTGAGCAAGGTGGATTCCTCCGCCAATGGCGGCGGCGGCTTCGGCCGGTCGCTGTCGGAATCGCCAATTCTGATATTCTCGTTCTTCCACAAGGCGATTCGGAACGAGCTCGACGCGCTGCACCGATTAGCGATGGCGTTTGCCACCGGAAACTGCTCCGACATCCAGCCCCTCTTCCAACGCTATCATTTCCTCAGATCGATGTACAGTCACCACTCCAATGCTGAAGATGAGGTGATTTTTCCAGCTCTAGATATACGTGTGAAGAATGTAGCACAGACATATTCCCTTGAACACCAGGGTGAAAGTGACCTCTTTGATCATCTATTTGAGCTGTTAAACTCTTCTGTCCACAATGATGAAAGTTTCCCAAAGGAGTTAGCATCCTGCACGGGAGCACTGCAGACATCAGTTAGTCAACACATGGCTAAGGAAGAGGAGCAGGTATTTCCTCTGCTTCTTGAGAAGTTCTCTCTTGAGGAGCAGGCATCTTTAGTTTGGCAGTTTCTCTGCAGTATTCCTGTGAATATGATGACAGAATTTCTTCCATGGCTTTCAACATCTATATCAACTGATGAATCTCAGGATTTACGGAAATGCTTAAGCAAGATAGTGCCAGAAGAAAAGCTTCTTCAAAAGGTTATTTTCACCTGGATGGAAGGGAGAAGTAGTGCTAACACAGTTGAAAATTGTGTAGATCATTCTCAGGTGCGATGTAATCCTAATCCTTTAACCCATCACAATGGGAAAATAAAGTGTGCATGTGAGCCCACTACAACTGGGAAAAGGAAATATTCTGGATCTGTCATAGATGTTTCTGATACCATGAGAACACATCCTATAGATGAAATATTGCTCTGGCATAATGCAATAAAACAAGAGTTAAATGAGATAGCAGCACAGACCAGAAAGATACAACTATCTGGAGATTTCACTAACCTGTCAGCTTTCAATGAAAGATTGCAATTCATTGCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTTATTTTTCCAGCAGTAGATGGAAAATTTTCTTTCTTTCAAGAACATGCTGAAGAAGAAAGCCAATTTAATGACTTCCGGTCTTTGATTGAAAGTATTCAAAGTGAAGGAGCAACATCTAGTTCAGAAACTGAATTTTTTTCCACTTTGTGTTCACATGCTGATCTTATATTGGAAACGATACAGAGGCATTTCCATAATGAAGAAGTTCAGGTTCTTCCTCTTGCGCGGAAGCACTTCAGCTTCAAACGGCAACGTGAACTTCTCTATCAAAGCTTATGCATGATGCCTTTGAAATTGATTGAGCGCGTCCTACCATGGTTGATTGGATCATTAACTGAAGATGAAGCACAAATGCTTTTGAAAAACATGCAATTAGCAGCTCCAGCAATAGATTCTGCTTTAGTCACACTTTTCTGTGGTTGGGCTTGCAAGGCTCGTAAAGATGGTTTGTGTTTGTATTCCAGTGTGTCAGGTTGTTGTCCTGCTCAGAGATTTACTGATATTGAAGAAAATATTGTTCAATCATCCTGTACTTCTGCTTCTGCATTGTCTGCTAGAGATTGCTCAGTCTTAGCTGAATTAGATGGGACACAACAAAGATCAGTAAAGCGAAACATACTGGACGTGCACAAGAATGAAAATGTCTCCAAAACTTCGGAATGTGAAAGTATTCAGAAACAGTGTTGTAGTGCTCGATCTTGTTGCGTGCCAGCTTTAGGAGTCAGCAGGAACAATTTGGGGCTGGGTTCAATCTCTACAACCAAGTCCTTACGCTCTTTGTCTTTCACAGCTTCTGCCCCATCTCTTAATTCTAGCCTTTTCATATGGGAAACAGACAACAGCTCAAGTGATGTTGGCTCCACAGAAAGACCAATTGATACCATATTTAAATTCCATAAAGCCATTCGCAAAGACTTGGAATATTTAGACATTGAATCTGGAAAGCTTTGTGATGGTGATGAAACAATTATTCGGCAATTTAGTGGAAGATTCCGGCTTTTGTGGGGTTTATATAGAGCTCATAGTAATGCTGAAGATGATATAGTATTTCCTGCACTTGAATCCAAAGAGGCACTTCACAATGTGAGCCATTCTTACACGCTGGATCATAAGCAGGAAGAAAAATTATTTGAAGATATTTCATGTGTTCTTTCTGAGCTTTCTGTCCTTCATGAGGACTTGAAGAGGACCCATGTTTCTACGGATTTAAGTGAGATTAATTTTGGAATTTCTGATTCCAATGATAATGATAATATCAAAAAGTACAATGAGCTTGCAACTAAGCTTCAAGGGATGTGCAAATCTGTTAGAGTGACCCTCGATCAACATATTTTTAGGGAAGAGCTCGAGCTCTGGCCATTGTTTGGAAAACATTTCACTGTGGAAGAACAAGACAAGATAGTGGGCCGAATAATAGGAACTACAGGTGCTGAAGTTCTCCAATCAATGTTACCATGGGTAACTTCTGCACTAACACAAGATGAGCAGAACAAAATGATGGACACATGGAAACAGGCAACTAAAAACACCATGTTCAATGAATGGCTAAATGAATGCTTGAAAGAAAGTCCTGTATCTATGTCACAGACAGAAGCGTCAGAGCGCAGCACTTCTCAAAGAGGTGGTGATTATCAAGAAAGCTTGAACCTGAATGAGCAGATGTTCAAGCCAGGTTGGAAAGATATATTCCGTATGAACCAGAATGAACTTGAGTCAGAAATCCGGAAGGTTTATCGTGACTCAACACTTGATCCACGGAGAAAGGCATACCTTGTGCAGAATCTAATGACAAGTCGCTGGATAGCAGCTCAACAGAAGTTACCTAAGGCTCCATCAAGGGAATCATCTAGTAAACAAATAGAAGGATGCTCACCATCATTTCGGGACTTGGAAAAACAAATATTTGGCTGTGAGCACTATAAGCGAAATTGCAAGCTACGAGCTGCTTGTTGTGGCAAGTTATTTACTTGCAGATTTTGTCATGATAATGCAAGTGATCACTCGATGGATAGAAAAGCAACATTGGAAATGATGTGTATGCAGTGCCTGACTATACAGCCAGTTGGGCCTATATGCATGTCACCTTCATGTAATGGACTTACAATGGCAAAGTATTATTGCAACATTTGCAAATTTTTTGATGATGAAAGGAATGTTTATCACTGCCCATTTTGCAATATATGCCGTGTTGGACACGGGCTTGGGATTGATTATTTTCATTGTATGAAATGCAATTGTTGCCTGGGAATAAAATCAGCATCTCACAAGTGCCTAGAGAAAGGTTTAGAAATGAACTGCCCAATTTGCTGCGATGACTTGTTCACATCAAGTGCAACAGTGAGAGCTTTACCTTGTGGGCATTACATGCATTCATCTTGCTTTCAGGCATATACTTGTAGCCACTACACATGTCCAATCTGCAGCAAATCATTGGGAGATATGGCGGATATACTCTGCCATGACTGTGATAGAAAGGGCACTTCACGCTTCCACTGGTTATATCACAAATGTGAATTTTGTGGTTCATACAATACCCGGGTAATCAAGAGTGAGGCAACAAATTCCAACTGCCATTAGTATGCTTCCTTTTTGCAATAAAATTAGAGTTTGTAAATATGTGTATAGCCAATCCAATTTTTCCTCAACCAGGAAACTGGTTACGTGTCATTTGATACATAATGCGAGTCACTTCAACGAAGGCCTTATGAGTTAATGGTCTTCTCGTAAGCCAGAATAGAAGCACCAACGAGTTCCATAGTTGTCATGTATAGTAGATAAGCTTTCTTCCAAACTTCTTTTTGCAGTGGATACTTTACCTGTTCCTCTTCTGCCTCATATAGTTCTAGTTTAAGTTCATTAAAATGCACACTAGCCTTCCAACACACCAATATTGGGTGAAGGGGCTCTAATTCAGCTGTCAGCTTCTTCTGTTAGATTTTGTTTTCTTTTTTTAATCTGACGATATAGTAGTATATGTATACCAAATGATTTTATGGAGCTTAATAAACAACAGTATATAACTTTTAGC 4391 0.4118 MATTPLTGLQHMDGGGGVAVLSNPVSKVDSSANGGGGFGRSLSESPILIFSFFHKAIRNELDALHRLAMAFATGNCSDIQPLFQRYHFLRSMYSHHSNAEDEVIFPALDIRVKNVAQTYSLEHQGESDLFDHLFELLNSSVHNDESFPKELASCTGALQTSVSQHMAKEEEQVFPLLLEKFSLEEQASLVWQFLCSIPVNMMTEFLPWLSTSISTDESQDLRKCLSKIVPEEKLLQKVIFTWMEGRSSANTVENCVDHSQVRCNPNPLTHHNGKIKCACEPTTTGKRKYSGSVIDVSDTMRTHPIDEILLWHNAIKQELNEIAAQTRKIQLSGDFTNLSAFNERLQFIAEVCIFHSIAEDKVIFPAVDGKFSFFQEHAEEESQFNDFRSLIESIQSEGATSSSETEFFSTLCSHADLILETIQRHFHNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLIGSLTEDEAQMLLKNMQLAAPAIDSALVTLFCGWACKARKDGLCLYSSVSGCCPAQRFTDIEENIVQSSCTSASALSARDCSVLAELDGTQQRSVKRNILDVHKNENVSKTSECESIQKQCCSARSCCVPALGVSRNNLGLGSISTTKSLRSLSFTASAPSLNSSLFIWETDNSSSDVGSTERPIDTIFKFHKAIRKDLEYLDIESGKLCDGDETIIRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYTLDHKQEEKLFEDISCVLSELSVLHEDLKRTHVSTDLSEINFGISDSNDNDNIKKYNELATKLQGMCKSVRVTLDQHIFREELELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECLKESPVSMSQTEASERSTSQRGGDYQESLNLNEQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKLPKAPSRESSSKQIEGCSPSFRDLEKQIFGCEHYKRNCKLRAACCGKLFTCRFCHDNASDHSMDRKATLEMMCMQCLTIQPVGPICMSPSCNGLTMAKYYCNICKFFDDERNVYHCPFCNICRVGHGLGIDYFHCMKCNCCLGIKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSSCFQAYTCSHYTCPICSKSLGDMADILCHDCDRKGTSRFHWLYHKCEFCGSYNTRVIKSEATNSNCH 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01484 1220 Gene3D nmb1532 protein domain like 45 195 - -
Pste9g01484 1220 Gene3D nmb1532 protein domain like 305 453 - -
Pste9g01484 1220 FunFam Zinc finger protein-related isoform 1 1123 1172 - -
Pste9g01484 1220 SUPERFAMILY Zinc hairpin stack 1065 1121 IPR037275 -
Pste9g01484 1220 Pfam Ring finger domain 1127 1169 IPR001841 -
Pste9g01484 1220 Gene3D - 1175 1217 - -
Pste9g01484 1220 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 1178 1217 - -
Pste9g01484 1220 Pfam Hemerythrin HHE cation binding domain 303 437 IPR012312 -
Pste9g01484 1220 Pfam Hemerythrin HHE cation binding domain 653 816 IPR012312 -
Pste9g01484 1220 Pfam Hemerythrin HHE cation binding domain 54 177 IPR012312 -
Pste9g01484 1220 ProSiteProfiles Zinc finger CTCHY-type profile. 1064 1127 IPR017921 -
Pste9g01484 1220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1121 1172 IPR013083 -
Pste9g01484 1220 CDD Hr-like 306 435 - -
Pste9g01484 1220 CDD Hr-like 49 175 - -
Pste9g01484 1220 Gene3D nmb1532 protein domain like 649 892 - -
Pste9g01484 1220 CDD Hr-like 655 815 - -
Pste9g01484 1220 Pfam Zinc-ribbon 1175 1208 IPR039512 -
Pste9g01484 1220 SUPERFAMILY RING/U-box 1126 1173 - -
Pste9g01484 1220 Pfam CHY zinc finger 999 1074 IPR008913 GO:0008270
Pste9g01484 1220 MobiDBLite consensus disorder prediction 885 905 - -
Pste9g01484 1220 SMART ring_2 1128 1169 IPR001841 -
Pste9g01484 1220 SUPERFAMILY CHY zinc finger-like 992 1056 IPR037274 GO:0008270
Pste9g01484 1220 ProSiteProfiles Zinc finger CHY-type profile. 992 1061 IPR008913 GO:0008270
Pste9g01484 1220 ProSiteProfiles Zinc finger RING-type profile. 1128 1170 IPR001841 -
Pste9g01484 1220 CDD RING-H2_Pirh2-like 1127 1170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01484 Pste-Chr9 14545475 14555060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01484 3 1219 C2H2 Transcription Factor Family AT3G18290 64.252 0.0 1620
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00272 3 1240395 1251135 Pste9g01484 9 14545475 14555060 PCT