Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01470 GACATTCTCTGCATTCCTGAATTCACTTAACTAGTTAGTTCCTTTGCTTGCAAGACCAGTTTTAGATTATGTTCCACTCATCTCCATTCCCTTCTTAAATTCTCAACACATCTTCTCTCTCTCTAACCATGGCTGTTGTGACAGAACACGTAAAATGGAGAACAAGAGACCAATTCAGACACCCCATTTCAGAAACTGATCCAAACCCTCAAATCCCTTCTATAATTCAATCCTCTCATACCAAATCCACCATCTCCTCTCTCTTATCTTCTTTCTCCACCTCCAATGAAACCACACATGACAGAGACCAAAACAGAAACAACAACAACAAAAGCAGCAGAAAATTCTCGGCAGCAGCCTTCAGAGGCTTCGGTTGCACTGCTGGTGCCTCTCAGAAGGTGTCAGTGCCGGCGGTGATTCGATCCTCAGCAGATTGGGAAGGGAAGAGGAACAGAAAGAAGAAGCACAGAAGAAACTATAACAGTAACAGTGGCAAAACATGTGATGGTGTTGTTGATGATGGTACATGTGTGGATTTTCAGGATGTTTGGTGTGGCCCTGGAATTGGATTCTCTACTGATGCTGCTCCACCTGTGGATTGTGTTGTGGCTAGGAACAATGTGTCTGCAAGAGGAAAACATCATGTGGTGGAGAGGGTAACACACAGGGAGCGTTCATCTTATTTTGGAAGACGCACTGTAAAGCCAGAAAGCTTCTCCTTTCAGGGTGATGAAACTGACATCTTCACAGCACGCCCTGGCTTAGAACCTTTTGACACTGCTAGATTCTACGGCCATGTTCCTCATCCTTCTCCTAATGGTCTTGCTGAGATAATGATACTTCAAGGAAGAATAATGATGGGAGGACGATTCAACTCACACGACCAATTTAGAGACTGGAGACTTGATGTTGATAACATGTCATACGAGCAATTGCTTGATCTGAGTGAGAGAATCGGTTATGTCAACACTGGGCTCAAAGAAGATGAGATGGGACTCAACATTAGGAAAGTTAAGCTTTCAGCTGGTTCGAATGATGCATCAAAGCATCAAATTGACAAAAAGTGCAGCGTTTGTCAGGAGGAGTATGAATCAGAGGATGAGCTGGGGAGATTGAAGTGTGACCACTGCTATCATTTTCAGTGTATAAAACAATGGCTTGTGCATAAAAACTTCTGCCCAGTTTGTAAGCAAGAAGTTGTGGTTCGACACTAAGAAGCACTGCCCCGTGCTTTTTACCCTTAAATTGGTGTATAGTTTTCCACGCAATATAAGCAATCCTCATTTATTATTTTAAAACTTTTGGCTTCCTTGTCGAAGGAGTTGGCAATATTATACTTGTAAGTGTTATTTTCGATAATGGCCCCCTAATTGGACAATGTTTTTGCATTTTAATTTTTATACTCAAGGTTTTCAAATTTGAATGTTGTCAGGTAAACTACGAGTTTATAGAGAACATTTGTTTATTATTCCTTTTTGTAGATGCCAACTCCAAGTTTTCTGTTTGTAACTTTCATCGGGGAACCCGCAGGTGCCATATGGTCCTTTTTTACTAATAGCATCTTCGATCACTGTTATTAAACATTTATCTTGAAATCAAGATGTGATCAACATTCATTGAAGT 1623 0.4104 MAVVTEHVKWRTRDQFRHPISETDPNPQIPSIIQSSHTKSTISSLLSSFSTSNETTHDRDQNRNNNNKSSRKFSAAAFRGFGCTAGASQKVSVPAVIRSSADWEGKRNRKKKHRRNYNSNSGKTCDGVVDDGTCVDFQDVWCGPGIGFSTDAAPPVDCVVARNNVSARGKHHVVERVTHRERSSYFGRRTVKPESFSFQGDETDIFTARPGLEPFDTARFYGHVPHPSPNGLAEIMILQGRIMMGGRFNSHDQFRDWRLDVDNMSYEQLLDLSERIGYVNTGLKEDEMGLNIRKVKLSAGSNDASKHQIDKKCSVCQEEYESEDELGRLKCDHCYHFQCIKQWLVHKNFCPVCKQEVVVRH 361
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01470 361 SMART ring_2 313 353 IPR001841 -
Pste9g01470 361 MobiDBLite consensus disorder prediction 49 69 - -
Pste9g01470 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 359 IPR013083 -
Pste9g01470 361 FunFam E3 ubiquitin-protein ligase rnf12-A 279 359 - -
Pste9g01470 361 MobiDBLite consensus disorder prediction 98 119 - -
Pste9g01470 361 SUPERFAMILY RING/U-box 312 359 - -
Pste9g01470 361 Pfam Ring finger domain 312 354 IPR001841 -
Pste9g01470 361 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 34 357 IPR045191 GO:0061630
Pste9g01470 361 ProSiteProfiles Zinc finger RING-type profile. 313 354 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste9g01470 Pste-Chr9 14317354 14323580 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01470 4 267 C3H Transcription Factor Family AT1G73760 36.842 1.00e-39 140
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01470 9 14317354 14323580 Pste9g01470 9 14317354 14323580 ECH