Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01458 AACCAAACACGTAGGAGCAATACTTCGATATGCTTGATTTCTAGGGTTTGAAGCACTCGCAATCTCACGTTGGAAGAAAATGAGCGAAAATACACATACCCAGAAGCGCGAAGCTGCAGATTCAGAGAGTAAGGAGGATTATGTATCGTCTAAGAAGGCAAAAATCGAATCCTGTGCAATGGGTTCTGATATAAATGGCGTAAAGGAACCTTCTTTCCTCATTGAAGCGGATGCTGCTGAAGATAAGGGCTCTAGACACACCATGGAAGATGCCTGGGTCGTGCTTCTCGACGCAACTTTAGATTATCCTGGAAATTTGAGATGTGCACACTTTGCAATTTATGATGGACATGGAGGCCGGTTAGCTGCAGAATATGCTCAAAAACATTTGCATCGGAATGTTCTTTCAGCAGGATTACCACGTGAGTTGTATGATGCGAAGGTAACTAGACGATCTATTTTGAATGGTTTCCTTAAAACTGATGAGTCTCTTCTTCATGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTGGGACAAAGAGTAGTATACTTATGGGTATTTTGTTGCACAATCTTGCAACAAAATTGGGAAAATCAATGTGCTGTTCCCTCCTTATATTTTATTCTTTTGACAAATTCTGCTCTTGGTTTCTTCCAGTCTTCTTTAAAGTCAGTGGTTGTGGTTGCAAATATAGGAGATGCCAAGGCAGTATTAGCTCGGTCAACTGATGGATCCCGAAATTTCCCAGATCGAGTCCAGGCACTGAAGGCCATTGTTTTGACAAGAGAACACAAACCTATTTTCCCCTTGGAGCGTGCACGCATTCAGAAGTCAGGTGGTTTTGTGAGCCCAGATGGACGATTACTAGGGCGTCTAGAAGTTTCTAGGGCTTTTGGAGATCGCCAGTTCAAAAAGGTGGGTGTTGTTGCAACCCCGGATCTCTATAGTTTTGAAGTTACCAATACGGAGCATTTCATTATTCTTGGCTGTGATGGCTTGTGGGGGGTATTTGGTCCCAGTGATGCCGTGGATTTTGTTCAGAAGTTGTTGAATGAGGGGCTACCTGTTGCTATTGTGAGTCGCCGTCTTGTAAGGGAGGCTGTACGTGAGCGTCGCTGTAAAGATAACTGCACTGCCATCATCATTGTATTCAAGCACAATTAGTTCTTGAGGCACAATGTCCATGTCTGTAATACCAGCCTAGGTTACCAATATTAATGGGATTTGTTTTCAGATGCATCTTTTCAAATCTATGTACAATATGTGAATGTGAATTACTTCCTACTTCCCACTACAATTGATGTCTCTAAAAGCTTACTGACTAGTTTTTACTCTTATGGAACTGAATGTGATGATTGTAATGAAATACATGTTGAAGTGTAATTGAGGTCAATTTGCTAAGCATCTAAATCGAACTCTTGGTACTTTCCTGGGAAATTTCGGTCCATTACAAATTTCTAAGAAATTTCAGACCGTTACATCCGAAGCTCTGGTACCCCACATGTTCATTCGATTTATATATGTTGTGGGGAAATGTAAGTAAACACAGTCCTTGTATACTAGTTCT 1592 0.4165 MSENTHTQKREAADSESKEDYVSSKKAKIESCAMGSDINGVKEPSFLIEADAAEDKGSRHTMEDAWVVLLDATLDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHRNVLSAGLPRELYDAKVTRRSILNGFLKTDESLLHESAEGGWQDGATAVCVWVLGQRVVYLWVFCCTILQQNWENQCAVPSLYFILLTNSALGFFQSSLKSVVVVANIGDAKAVLARSTDGSRNFPDRVQALKAIVLTREHKPIFPLERARIQKSGGFVSPDGRLLGRLEVSRAFGDRQFKKVGVVATPDLYSFEVTNTEHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVAIVSRRLVREAVRERRCKDNCTAIIIVFKHN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01458 369 ProSiteProfiles PPM-type phosphatase domain profile. 49 366 IPR001932 -
Pste9g01458 369 Pfam Protein phosphatase 2C 208 354 IPR001932 -
Pste9g01458 369 Pfam Protein phosphatase 2C 53 162 IPR001932 -
Pste9g01458 369 SMART PP2C_4 35 364 IPR001932 -
Pste9g01458 369 PANTHER PROTEIN PHOSPHATASE 2C 22 364 IPR015655 GO:0004722|GO:0006470
Pste9g01458 369 SUPERFAMILY PP2C-like 46 367 IPR036457 -
Pste9g01458 369 CDD PP2Cc 53 366 IPR001932 -
Pste9g01458 369 MobiDBLite consensus disorder prediction 1 23 - -
Pste9g01458 369 Gene3D - 40 369 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01458 Pste-Chr9 14098438 14104916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01458 10 318 PP2C-type Phosphatase Gene Family AT1G18030 55.927 2.96e-114 333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01458 9 14098438 14104916 Pste9g01458 9 14098438 14104916 ECH