Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01451 GAAGAAAAAGGGTGTAGCCGTTGCAGTTCTTTAGTCTCAAACGCGCTCTTATCTTCCTCTTTCATATTTTCAGTCTTTTTCTCTCTCTACACTCACACACACACACACACCATTCCACTCCACATTCAGAATAAAACCCTCACTCTCTATTTCTCTACATTGTTTCAGTTCAATTTCGTCTGCAGTTTGTAGATTACGATTTTCCCCTCAGCAAACCCTAGCCAATTCTAGATGACTCGCTTATAAATTCGCAATTTTGTTGCTCAATTTCAGCTGTAATTGGTAGTTTCATTGCATCTTTGCGACCAATCTTGGGGAGAGAATGGCAGAACTCGATCTGTCCAAAAAAGTAGCCGATAGGTATCTCAAGCGTGAGGTCCTTGGTGAAGGTACATACGGTGTCGTTTACAAAGCCATTGATACACAGACAGGGCAGACGGTTGCAATTAAGAAGATCCGGCTTGGCAAGCAGAAAGAAGGGGTCAATTTTACAGCTCTCAGAGAAATTAAACTGCTTAAGGAGCTCAGAGATCCTAACATTATTGAGTTGATTGATGCCTTTCCACATAAAGGGAATTTGCATCTTGTGTTTGAATTCATGGAGACAGACCTTGAAGCTGTTATACGGGACAGGAATATTTTCCTTTCACCTGGTGATATAAAATGTTACCTTCAGATGACACTAAAAGGCCTTGCTATTTGCCACAAGAAATGGGTGTTGCATAGGGATATGAAGCCAAATAACTTGTTGATAGGATCTAATGGACAGCTGAAACTTGCAGATTTTGGTTTAGCCGTGTATTTGGAAGCCCAGATCGAAGGTTCACTCATCAGAGCACCTGAGCTATTATTTGGTACCAAGCAGTATGGTCCAGGGGTAGATGTTTGGGCTGCAGCTTGTATATTTGCTGAACTACTTCTTCGTCGACCCTTCCTGCAGGGTTCAAGTGATATCGATCAATTAGGAAAGATTTTCTCAGCATTTGGAACTCCATCTGCTTCTCAGTGGCCTGATCTTATATTCCTACCTGATTATGTTGAATATCAACATGTTCCTGCCCCACCTTTGCGCTCTTTATTTCCAATGGCTACTGATGATGCTTTAGATTTGTTATCAAAGATGTTTACTTATGATCCAAAGGCTAGAATTTCAGTGCAGCAGGCATTAGAGCACAGGTACTTCTCTTCTGCACCTTTGCCCACAGTTCCTGATAAACTTCCAAGACCTGCACCTAAGAAGGAATCTAAGGCTTCAGATATAATTTCAAATGAAGGTCCTACTGTCTTGTCACCTCCAAGAAAGTCTAGGAGAGTAATGCCAGGGCATGATGGGTCTGAAGGCAATTCTTTGCAAGGTGATAAGTTTGATGACAGTGTTAGTGTCAGACAGGCGGCTGGTGATAATACAGGCAAGAATGAGCCAGCTCCAATGTCACTAGATTTTTCTCTTTTTGGATTGAAACCTCCAAATAGACCTACAATTACCAGTGCTGACAGATCACATTTGAAAAGAAAATTAGATCTAGAATTCTAGCAGCCAGCCAGAATGGACATTCTATGATGGTATGCATCAGTACAAGGGGTCTGATAGAGAAAAGACTGAATCAGCTTCGCCTGTATGTCGCTCCTATCTCTGTCTCTCTGCATGAAGCTACTATGATTATGTAGATGTTTAAAGGAAAAAGTAGCAGTGACAGCTGATTAGCATCTCACTTGAGTAGTAGTTCAGAGAGTTGAAAGTAACTATCATAGACTAAAAAGAATAAATAACCATACTCTTTTGTTCTCCACATTCCAGAGAACTTGTATCTCTCCACGAAAGGCCTTGAGTGAGGGCATTTTCTTTAGCTCCTTGCTGCATATCTGACGCTTGAAAAATAGTGGTTGGGGAAAATTTCATTCTAACACTGATTTGTTATTGAACATAAAGAGAAATTATTGCTTACACTTTAAGTGTATAATATGTATTTTCTTTAGGGGTTCAAATAGGTTGTGTACTGAGCAATTTTTTATAGACATTGTGGTTGATTTTGATTTTTGGTTGATTGCATGCGAATTCTGGCGTGCTGAGTTTGTTTCATTT 2083 0.4028 MAELDLSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELRDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPGDIKCYLQMTLKGLAICHKKWVLHRDMKPNNLLIGSNGQLKLADFGLAVYLEAQIEGSLIRAPELLFGTKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFSAFGTPSASQWPDLIFLPDYVEYQHVPAPPLRSLFPMATDDALDLLSKMFTYDPKARISVQQALEHRYFSSAPLPTVPDKLPRPAPKKESKASDIISNEGPTVLSPPRKSRRVMPGHDGSEGNSLQGDKFDDSVSVRQAAGDNTGKNEPAPMSLDFSLFGLKPPNRPTITSADRSHLKRKLDLEF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01451 403 SUPERFAMILY Protein kinase-like (PK-like) 9 294 IPR011009 -
Pste9g01451 403 FunFam Mitogen-activated protein kinase 93 297 - -
Pste9g01451 403 FunFam Cyclin-dependent kinase D-1 5 94 - -
Pste9g01451 403 PANTHER CELL DIVISION PROTEIN KINASE 12 293 - -
Pste9g01451 403 SMART serkin_6 14 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01451 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Pste9g01451 403 Gene3D Transferase(Phosphotransferase) domain 1 95 303 - -
Pste9g01451 403 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
Pste9g01451 403 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Pste9g01451 403 MobiDBLite consensus disorder prediction 293 403 - -
Pste9g01451 403 MobiDBLite consensus disorder prediction 344 360 - -
Pste9g01451 403 CDD STKc_CDK7 13 300 IPR037770 GO:0005675|GO:0008353|GO:0070985
Pste9g01451 403 Pfam Protein kinase domain 16 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g01451 403 ProSiteProfiles Protein kinase domain profile. 14 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01451 Pste-Chr9 13992950 14000586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01451 8 403 Core Cell Cycle Gene Families AT1G73690 72.277 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Pste9g01451 Pkinase 1.2e-62 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01451 9 13992950 14000586 Pste9g01451 9 13992950 14000586 ECH