Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01447 GGACGTAGAAGAGATGGGCGGAGTGGGAGGCCCAGCCCAAAGTCTAAGCTGGAACTGAAAGTCGGTAAAGGGAAAGAACGAAAAGCAGAACACCGTGCACCGTCGTGTGGACCGTTCCACCTCTTCTCCCACAAAAAGACGCCGCAACTTAACAAATCATTCACCACACAAACACTCTCACACTCTTTCTGTGAATTTCTGAAGAAACCCTAATTCCATGACTCCTCGCGTCGACGATTTCGAATCGGACAATCTTTCCGCCACCGACGACGACGATGACGACGGTCTCAAGGAGGACATGGCTGCCCTCGCCCGAGCCTGCATGATCGCCGGGCCGCTCGTCGACGATCATTCCACCGGAGCTCGTGTTCCCACGGTCGACCCGCTCCTCCATACCGGCGATGCCATTGTTCCGGCCACGACCGCCACCTTTTTCGACGACGACGACGACGAAGACGACTATGAGTGCCTTAGGAGAGTGCAGAGACTCTACCAACCTCTGTCCGTGCTTCCTCCGCTGACGCCGGCGGTCGGCTTGTCTGACGACGATGACGAGGACGACCTCGAGACTGTCCGCGCCATCATGAAAAGGTTCAGTTCCTACAACGAAGGTGGAACAAAAATGTTGGTTGAGGAGGATCAGACCTCTAGCCCCGGCTTTGAGGGTGACATTGCCAACGGCTCAATTAGTAATGAATCAGATGGTAGTGAATTATGTCCAGTCTCTCAATATCCTAATGAGGGTGCCACCAAGAAGTTGGTTGAGAACATTGAAACGCAGCTTAGTGATTTTGTTGAGAGTTCTGAACCTGATGCCTGTGAGTCATCCAGATTACCACATAATAGGTTGAGCTGTCCTCCTGTAGTTCAGTGTTTTGTTGATGCCATTAAGAAAAATAGGGATTTGCAGAGATTTATTAGAGGTAAGATGATTGAGCTTGAGACCAAAATTGAGGAAAACAAAAAGATAAGGAACAAAATTAAAATTCTCAAGGACTTCCAGGCTTCATGCATTAGAAGAACAGGGAATGCTTTGTCACTTAAAAAAGATCCACGCATTCAGTTAATATCTGCAAGAAGGTCTTCTGCTCCAAAGAACTCTAAGAGACAGAAAAAAGTATCTGCAATGTGTTATGGCCCTGAAGAGAATTCTCATGTTGCTAATTATAGGATGGTATTGGAGCGATTTCCACTTTCATTGGATAGGAAAAAATGGTGTAATGGAGAAAAGAACAGTCTTTTGAAGGGAATTAAGCAACAATTCCAAGAAATGGTACTTCAACATTCACTTTCTGTCGATAGAACAAGTTCAGAAGACTTGCTTGGAGATGCAAATGACATGGATAATATAATTGCATCTGTTAAAGATCTTGAAATCACTCCAGAGAGGATTAGAAAATTTTTACCAAAAGTTAATTGGGATATGATAGCTTCCATGTATGTTGGTGGCCGTACTGGTGCTGAATGTGAATCAAGTTCTTTGACTATTGTTTCATGTTCATTGCCTTTCCATGAAGATTATCTTCCCCCTGCATTGCGGACATCTATGACGATCTCCATCACAGACAGTTTACCATTTTTGGATTTCAATAGAGTTCAAGATCAACACATATATTGCAGGTGGTTGAATTGTGAAGATCCTTTGATCAATCAAGGTGCATGGACTAATGAAGAGGACAGGTCTCTTTTACTTATTGTCCAAGACATGGGCATCAGGAACTGGTTTAATATTGCAGCATCATTGGGCACAAGCAGGACTCCATTTAAATGCTTGGCACGATTTCAAAGGAGCTTAAATCCTTCAATGCTAAATAGCGAATGGACTGAGGAAGAAGATTCTCAACTTTGTTCTGCTGTGGCATGTTATGGTGATAAGGATTGGCAGTCTGTGGCTTCTCTTTTAGAAAGGCGGACAGGAACCCAGTGCTCAAATAGATGGAAAAAATCCCTTTGTCCTGAGAAGAAAGGGAGCTTTACTCGAGATGAGGATATACGGCTAACAGTAGCAGTCATGCTTTTTGGACGGAGATGGAATCAAATAGCTAAATATGTTCCTGGCCGGATCCAATCTCAGTGTAGGGACAGATACCTCAATAGTCTGGATCCTTCTTTGAAATGGGGTGGATGGACTGAGGAAGAGGATTTAAGATTAGAAGCTGCAATTGCCAAGCATGGATACTGCTGGTCTAAGATTGCTGAAGAAGTGCCTCCCCGTACTGATTCTCAATGCCGGAAGAGATGGAAAGTGTTATGTCCTGAACAAGTTCCTTTGCTTCAAGAAGCTAGAAAGAAGCAAAGGTCTATTATTGGTAGTAACTTTGTTGATCGTGAATCTGAACGCCCAACCATTACACTGAACGACTTTCTACCTTTACCTGCATTAGATCAAAAATCTGATTTTGGTGCTTCAAATATCGGCAAGAAGGGCAATTCAAGAAGCAGTGTTCCTAAGAAAAATAGCTCTAAGAAACGTGCAAAAAGAACTCGACTTCATACCAAGGAAATTAAAGATACAGTGGTACATAGTGATGAGGAATGTGGTGAAGATGTCCCAGTCTCTGCATGCAGCAATCTTCCCACGAAGGGCAATTCCAGAAGCAATGTTCCTAAGAAACGTGTAAAAAGAACTCGGCTTCGCACCAAGGAAATAAAAGATACAGTGGTACATAGTGATGAGGAATGTGGTGAAGATGTCGCAGTCTCTGCATGCAGGAATCTTCCCAAGAAGATGGGGTCCAAAAGGCATGCAAAAGACACTCAAAGTTGTCCCAAGGAAGTAGTGGATGTATCTTGTAATGACAAGGTCAAAACATGTATTGGGAGTTCAGAAAGTCAATCTACATGTATTACAAGTTCTGAAAATCTAGATTCAGACGACATAACTATTGGATTCTTTTTACGTAATAAGTCAAAGGAGATACTATCTAGATTTATCAAAGATTTGAATCAGCCTTCCTTCTCCTCTGGGATTACTGATTTTTCTAAGCAGATTGAAAGTCAAGACCCAATTGATGACCAAAGCGGTTTGTCCCAGTCTTGTGATACTGTTGGAACTAAAAATTTGTTAGTGCGACAGAATGTTTCTTCTGATAGACAACTGGGTAAGCGGGAGGATGCAAACACTTTGACAGATGATGACGACGAAGATATGACTCTTGCGTGCTTTCTGGTAGACAAACCAAAGAAAGGGAGTCAAACTGCTAAAGGACGTTGTGCACGCTCTTCTTCTAATTTGAAAAAGGTATCTGCATCACTACGTGAAGAGGATTGTGCAAGTAAGCCGGCCATCGAATCTGATGACAATGGACCGTCAATGTCAAAGCATGTTGAAGAGGAGACTGTTTTTGGTGTTTCTGAACCAATGGACATCATTGTCGAAGAAACGGATGATGAGCTTCTTACTTGCTTACAAAATAGGCCAAAGAGGCAGCGAAAACGACCCAGTAGATTTTTATAAAAACTTGCGCCATAAATTCTGTAAGTGACTAAGGAATATACAAAAGTTTTAGTAATTGAAAGCTCAGTTTGTTATGACCATGAATTTGAGTTGCTTTAGGTGCAGTGAGTTTCAAGTTCATTATGGTGAGGTTAGGCCTGTATACAGATTTTCGGCCTGACGCATTTTGTAAACTGGCGGAATGCCAGAAGTCTGTTCCCATTTTATATTTTGTATCCCCTGTAAAACACCTGAGACTATAAACTAGCAAAACCAGTGAATTG 3720 0.4274 MTPRVDDFESDNLSATDDDDDDGLKEDMAALARACMIAGPLVDDHSTGARVPTVDPLLHTGDAIVPATTATFFDDDDDEDDYECLRRVQRLYQPLSVLPPLTPAVGLSDDDDEDDLETVRAIMKRFSSYNEGGTKMLVEEDQTSSPGFEGDIANGSISNESDGSELCPVSQYPNEGATKKLVENIETQLSDFVESSEPDACESSRLPHNRLSCPPVVQCFVDAIKKNRDLQRFIRGKMIELETKIEENKKIRNKIKILKDFQASCIRRTGNALSLKKDPRIQLISARRSSAPKNSKRQKKVSAMCYGPEENSHVANYRMVLERFPLSLDRKKWCNGEKNSLLKGIKQQFQEMVLQHSLSVDRTSSEDLLGDANDMDNIIASVKDLEITPERIRKFLPKVNWDMIASMYVGGRTGAECESSSLTIVSCSLPFHEDYLPPALRTSMTISITDSLPFLDFNRVQDQHIYCRWLNCEDPLINQGAWTNEEDRSLLLIVQDMGIRNWFNIAASLGTSRTPFKCLARFQRSLNPSMLNSEWTEEEDSQLCSAVACYGDKDWQSVASLLERRTGTQCSNRWKKSLCPEKKGSFTRDEDIRLTVAVMLFGRRWNQIAKYVPGRIQSQCRDRYLNSLDPSLKWGGWTEEEDLRLEAAIAKHGYCWSKIAEEVPPRTDSQCRKRWKVLCPEQVPLLQEARKKQRSIIGSNFVDRESERPTITLNDFLPLPALDQKSDFGASNIGKKGNSRSSVPKKNSSKKRAKRTRLHTKEIKDTVVHSDEECGEDVPVSACSNLPTKGNSRSNVPKKRVKRTRLRTKEIKDTVVHSDEECGEDVAVSACRNLPKKMGSKRHAKDTQSCPKEVVDVSCNDKVKTCIGSSESQSTCITSSENLDSDDITIGFFLRNKSKEILSRFIKDLNQPSFSSGITDFSKQIESQDPIDDQSGLSQSCDTVGTKNLLVRQNVSSDRQLGKREDANTLTDDDDEDMTLACFLVDKPKKGSQTAKGRCARSSSNLKKVSASLREEDCASKPAIESDDNGPSMSKHVEEETVFGVSEPMDIIVEETDDELLTCLQNRPKRQRKRPSRFL 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01447 1079 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 583 628 IPR017930 -
Pste9g01447 1079 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 527 582 IPR017930 -
Pste9g01447 1079 ProSiteProfiles Myb-like domain profile. 582 628 IPR001005 -
Pste9g01447 1079 Pfam Myb-like DNA-binding domain 583 626 IPR001005 -
Pste9g01447 1079 Pfam Myb-like DNA-binding domain 636 677 IPR001005 -
Pste9g01447 1079 Pfam Myb-like DNA-binding domain 482 543 - -
Pste9g01447 1079 MobiDBLite consensus disorder prediction 1 24 - -
Pste9g01447 1079 MobiDBLite consensus disorder prediction 727 761 - -
Pste9g01447 1079 CDD SANT 481 526 IPR001005 -
Pste9g01447 1079 ProSiteProfiles Myb-like domain profile. 527 578 IPR001005 -
Pste9g01447 1079 SUPERFAMILY Homeodomain-like 530 624 IPR009057 -
Pste9g01447 1079 Gene3D - 582 634 - -
Pste9g01447 1079 ProSiteProfiles SANT domain profile. 637 680 IPR017884 -
Pste9g01447 1079 ProSiteProfiles Myb-like domain profile. 629 679 IPR001005 -
Pste9g01447 1079 Gene3D - 533 581 - -
Pste9g01447 1079 MobiDBLite consensus disorder prediction 1010 1036 - -
Pste9g01447 1079 CDD SANT 585 628 IPR001005 -
Pste9g01447 1079 CDD SANT 534 578 IPR001005 -
Pste9g01447 1079 CDD SANT 637 678 IPR001005 -
Pste9g01447 1079 Gene3D - 476 526 - -
Pste9g01447 1079 SUPERFAMILY Homeodomain-like 608 680 IPR009057 -
Pste9g01447 1079 SUPERFAMILY Homeodomain-like 464 522 IPR009057 -
Pste9g01447 1079 ProSiteProfiles Myb-like domain profile. 474 526 IPR001005 -
Pste9g01447 1079 SMART sant 633 681 IPR001005 -
Pste9g01447 1079 SMART sant 478 528 IPR001005 -
Pste9g01447 1079 SMART sant 531 580 IPR001005 -
Pste9g01447 1079 SMART sant 582 630 IPR001005 -
Pste9g01447 1079 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 465 1034 - -
Pste9g01447 1079 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 629 683 IPR017930 -
Pste9g01447 1079 Gene3D - 636 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01447 Pste-Chr9 13937371 13945128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01447 198 842 MYB-Related Transcription Factor Family AT3G18100 42.121 6.70e-160 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste9g01447 Myb_DNA-bind_6 5.8e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01447 9 13937371 13945128 Pste9g01447 9 13937371 13945128 ECH